KEGG   Rattus norvegicus (rat): 29673
Entry
29673             CDS       T01003                                 
Symbol
Psma6
Name
(RefSeq) proteasome subunit alpha type-6
  KO
K02730  20S proteasome subunit alpha 1 [EC:3.4.25.1]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03050  Proteasome
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05017  Spinocerebellar ataxia
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    29673 (Psma6)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    29673 (Psma6)
   05012 Parkinson disease
    29673 (Psma6)
   05014 Amyotrophic lateral sclerosis
    29673 (Psma6)
   05016 Huntington disease
    29673 (Psma6)
   05017 Spinocerebellar ataxia
    29673 (Psma6)
   05020 Prion disease
    29673 (Psma6)
   05022 Pathways of neurodegeneration - multiple diseases
    29673 (Psma6)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    29673 (Psma6)
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:rno03051]
    29673 (Psma6)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.25  Threonine endopeptidases
    3.4.25.1  proteasome endopeptidase complex
     29673 (Psma6)
Peptidases and inhibitors [BR:rno01002]
 Threonine peptidases
  Family T1: proteasome family
   29673 (Psma6)
Proteasome [BR:rno03051]
 Eukaryotic proteasome
  Core particles (20S proteasome)
   alpha type subunits
    29673 (Psma6)
SSDB
Motif
Pfam: Proteasome Proteasome_A_N
Other DBs
NCBI-GeneID: 29673
NCBI-ProteinID: NP_058979
RGD: 61849
Ensembl: ENSRNOG00000007114
UniProt: P60901 A6HBM1
Structure
Position
6:78500676..78531693
AA seq 246 aa
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL
LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD
ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE
KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV
ALAERD
NT seq 741 nt   +upstreamnt  +downstreamnt
atgtcccgtggttccagcgccggttttgaccggcacattactattttctctcccgagggc
cgactctaccaagtagaatatgcttttaaggctattaaccagggtggacttacatctgta
gctgtcagaggaaaggactgcgcagttattgtcacacagaagaaagtacctgacaaacta
ctggattccagcaccgtgactcacttattcaagataacggaaaacattggctgtgtgatg
acaggaatgacagctgacagcagatcccaggtacagagggcacgctatgaagcagctaac
tggaaatacaaatatggctatgagattcctgtggacatgctgtgtaaaagaattgctgat
atttctcaagtctacacacagaatgctgaaatgaggccacttggttgttgtatgatttta
attggtatagatgaagagcaaggccctcaagtgtacaagtgtgatcctgcaggctactac
tgtggctttaaagccaccgcagcaggagtgaagcagacagagtcaaccagcttcctcgaa
aaaaaagtgaagaagaaatttgattggacatttgaacagacagtggaaactgcaatcaca
tgcctgtctactgttctgtcgattgatttcaaaccttcagaaatcgaagttggagtagtt
acagttgaaaatcctaaattcaggattcttacagaagcagagattgacgctcaccttgtg
gctctagcagagagagactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (8)   
   KEGG PATHWAY (8)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (14)   
   RefSeq(nuc) (2)   
   GenBank (6)   
   EMBL (6)   
3D Structure (5)   
   PDB (5)   
Protein domain (2)   
   Pfam (2)   
All databases (46)   

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