KEGG   Rattus norvegicus (rat): 29678
Entry
29678             CDS       T01003                                 
Symbol
Sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    29678 (Sart1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    29678 (Sart1)
   04121 Ubiquitin system [BR:rno04121]
    29678 (Sart1)
Spliceosome [BR:rno03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    29678 (Sart1)
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    29678 (Sart1)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    29678 (Sart1)
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 29678
NCBI-ProteinID: NP_113784
RGD: 61930
Ensembl: ENSRNOG00000020475
UniProt: Q5XIW8
Position
1:complement(212119824..212128517)
AA seq 806 aa
MGSSKKHRGEKEAAGTTAAAGTGGTTEQPPRHREHKKHKHRSSGGGSSGGERRKRSRERG
AERGSGRRGAEAEARSGAHGRERSQAEPSERRVKREKRDEGYEAAASSKASSGDASSLSI
EETNKLRAKLGLKPLEVNAVKKEAGTKEEPVAADVINPMALRQREELREKLAAAKEKRLL
NQKLGKIKTLGEDDPWLDDTAAWIERSRQLQKEKDLAEKRAKLLEEMDQEFGVSTLVEEE
FEQRRQDLYSARDLQGLTVEHAIDSFREGETVVLTLKDKGVLQEGEDVLVNVNMVDKERA
DKNVELRKKKPDYLPYVEDESVDDLAQQKPRSILAKYDEELEGERPHSFRLEQGGMADGL
RERELEEIRTKLRLQAQSLNTVGPRLASEYLSPEEMVTFKKTKRRVKKIRKKEKEVIMRA
DDLLPLGEDQTQDGDFGSRLRGRGRRRVPEVEEEALEDEEKDPVAQPPPSDDTRVENMDI
SDEEDGGALPSGPPELEEDEAELELQKQLEKGRRLRQLQQLQQLRDSGEKVLEIVKKLES
RQRGWEEEEDPERKGTIVFNATSEFCRTLGEIPTYGLAGNREEQEELMDFERDEERSANG
GSESDGEENIGWSTVNLDEEKQHQDFSASSTTILDEEPIVNRGLAAALLLCQNKGLLETT
VQKVARVKAPNKSLPSAVYCIEDKMAIDDKYSRREEYRGFTQDFKEKDGYKPDVKIEYVD
ETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQE
KQKAQKTPYIVLSGSGKSMNANTITK
NT seq 2421 nt   +upstreamnt  +downstreamnt
atggggtcgtcaaagaagcaccgtggagagaaggaggcagccgggactacggctgcggcc
ggtaccgggggcactaccgagcagccgccacggcatcgagagcacaagaaacacaagcat
cggagcagcggcggcggcagcagcggcggcgaacgacggaagcggagccgcgagcgtggg
gccgagcgcgggagcgggaggcgcggggccgaagccgaggcccgcagcggcgcgcatggt
cgtgaacgaagccaagcggaaccctcggagcggcgcgtgaagcgggagaaacgcgatgaa
ggctatgaggccgctgccagctccaaagccagctctggagatgcctcatcactcagcatc
gaggagaccaataaactccgagcaaagttggggttgaagcccttggaagtcaatgctgtt
aagaaagaggcgggcaccaaggaggagcccgtggcagccgatgttatcaaccccatggcc
ttgcgacagcgtgaagaactacgggagaagctggcagctgccaaggaaaagcgcttgctg
aaccaaaaattggggaaaataaagacactgggggaggatgacccctggcttgatgacact
gcagcctggatagagaggagccggcagctacagaaagagaaggacttggcggagaagcgg
gccaagctgctagaagagatggaccaagagtttggtgtgagcactttagtggaggaggag
tttgagcagaggcgacaggacctgtacagcgcccgggacttgcaaggcctcaccgtggaa
catgcaatcgattcctttcgagaaggggagactgtggtcctcactctcaaggacaaaggg
gttctgcaggagggggaggatgtgctggtgaatgtgaacatggtggacaaggagcgagca
gacaagaacgtggaacttcggaagaagaagcctgactacctgccctatgtggaggacgag
agtgtggatgacttggcacagcaaaaacctcgctctatcctggccaaatatgatgaggaa
ctggagggcgagcggccacattccttccgtttagagcagggtggcatggccgatggcctg
agagaacgagagctcgaagaaatccggaccaagctacggctgcaggctcagtctctgaac
actgtagggccccggcttgcctctgagtacctcagtccggaggagatggtgactttcaaa
aagaccaaacggagagtgaagaaaatccgaaagaaggagaaggaggtaataatgcgggca
gatgacttgctgccccttggcgaagaccagactcaggacggggactttggatccaggctt
cggggccggggtcggcgccgagttcctgaagtggaggaggaggcccttgaggatgaagag
aaggaccctgtggcccagccgccaccatcagatgacactcgcgtagagaacatggacatc
agtgatgaggaggatgggggggctcttccctcggggcccccagagctggaggaggacgaa
gcggagctggagctgcagaagcagctggagaaggggcgccggctgcggcagctgcagcaa
ctgcagcagctgcgggacagcggtgagaaggtgctggagattgtgaagaaactggagtct
cgccaacgtggctgggaagaggaagaggatcctgagcggaaggggaccatcgtgttcaat
gccacttctgagttctgtcgcactctgggggaaatccccacttacggattagctggcaac
cgagaggagcaggaggagctcatggactttgaaagggatgaagagcgctcggccaatggt
ggctctgaatcagatggcgaagagaacattggctggagcaccgtcaacctggatgaggag
aagcaacatcaggatttctccgcttcctctaccaccatcctggatgaagagcccattgtg
aacagagggctggcggctgccctgctcctgtgtcagaacaaaggactgttggagaccacg
gtacaaaaggtggcccgagtaaaggctcccaataagtcactgccttcagcagtgtactgc
atcgaggataagatggccattgatgacaagtacagccgacgtgaggagtacaggggcttc
acccaggacttcaaggagaaggatggctacaagcccgatgttaagattgaatatgtggat
gagacgggcaggaaactgactcccaaggaggcattccggcagctgtcccaccgcttccat
gggaagggctcagggaagatgaagactgagcggcggatgaagaagctggatgaggaggcg
ctcctaaagaaaatgagttccagtgacacgcccctgggaaccgtggcactgctccaggag
aagcagaaggctcaaaagacaccgtacatcgtgctcagtggcagtggcaagagcatgaat
gcgaacaccatcaccaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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