KEGG   Rattus norvegicus (rat): 296954
Entry
296954            CDS       T01003                                 
Symbol
Tnpo3
Name
(RefSeq) transportin-3
  KO
K15436  transportin-3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03013  Nucleocytoplasmic transport
rno03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    296954 (Tnpo3)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    296954 (Tnpo3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    296954 (Tnpo3)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    296954 (Tnpo3)
SSDB
Motif
Pfam: Xpo1 Importin_rep_3
Other DBs
NCBI-GeneID: 296954
NCBI-ProteinID: NP_001100057
RGD: 1308938
Ensembl: ENSRNOG00000021758
UniProt: A6IEE3
Position
4:complement(59108278..59197012)
AA seq 923 aa
MEGAKPTLQLVYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQIRQDVESC
YFAAQTMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMP
SWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTV
VSLLMTCVEKAGTDEKMLMKVFRCLGSWFNLGVLDSNFMANNKLLALLFEVLQQDKTSSN
LHEAASDCVCSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEV
IHSIFKAYIQRLLHALARHCQLEPDHEGVPEETDDFGEFRMRVSDLVKDLIFLIGSMECF
AQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLVEVLEGVVHLPETVHTAVRYT
SIELVGEMSEVVDRNPQFLDPVLGYLMKGLCEKPLASAAAKAIHNICSVCRDHMAQHFNG
LLEIAHSLDSFMLSPEAAVGLLKGTALVLARLPLDKITECLSELCSVQVMALKKLLSQEP
SNGISSDPTVFLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNKHRADNRIVE
RCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYHVHQHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCIPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQRSPVTLLRSQVVIPILQWA
IASTTLDHRDANSSVMRFLRDLIHTGVANDHEEDFEVRKELIGQVMDQLGQQLVSQLLHT
CCFCLPPYTLPDVAEVLWEIMQVDRPTFCRWLENSLKGLPKETTVGAVTVTHKQLTDFHK
QVTSAEECKQVCWALRDFTRLFR
NT seq 2772 nt   +upstreamnt  +downstreamnt
atggaaggagccaagccaaccttgcagctcgtgtaccaggcggtgcaggcgctttaccac
gacccagatcccagcggaaaggagcgcgcctcgttttggcttggggagctgcaacgttcg
gttcatgcgtgggagatttctgatcaattgttacagatccgacaggatgtggaatcatgc
tatttcgctgcccagaccatgaaaatgaagattcagacctcattttatgagcttcccaca
gactcccatgcttctttaagggactcattgctaactcatattcagaacttgaaagacttg
tcacctgtcattgtaacacagctggctttagcaatagcagaccttgccctacagatgcct
tcttggaagggatgcgtacaaacattggtagaaaaatatagcaatgatgtaacttctttg
ccttttttgctggaaatccttacagtgttacctgaagaagtacacagtcgttccttgcgg
attggagccaacaggcgcacagaaattatagaagacttagccttctactctagtacagtg
gtttctttattgatgacatgtgtagagaaagcaggaactgacgagaagatgcttatgaag
gtcttccgatgtttgggaagttggtttaacttgggagttttggacagtaacttcatggct
aataataagttattagcactcctttttgaggttttgcaacaagataagacctcatctaac
ctacacgaagctgcttctgactgtgtgtgctccgctctctatgctattgaaaatgtagag
actaacttgccattggccatgcagctttttcagggcgtcctgacactggagactgcctat
catatggctgtggcacgggaagatttagacaaagttctgaattactgccgtatcttcacc
gaactatgtgaaacttttctggaaaaaattgtctgtactccaggccaaggtctgggagat
cttcgaactttggaattgcttcttatctgcgcaggccaccctcagtatgaggtagtagaa
atttcctttaacttttggtaccggctaggagaacatttatacaaaaccaatgatgaagtt
attcacagcatcttcaaagcatatattcagaggctgcttcatgccttggctcgacactgc
cagttggaaccagaccatgaaggagttcctgaagagactgatgactttggggagtttcga
atgagagtgtcagacctggtgaaggacttgattttcttgattggatctatggagtgcttt
gctcagttgtactctactctgaaggaaggcaatccaccctgggaggtgacagaagcggtc
ctctttatcatggctgctatagcaaagagtgttgatccggagaacaatcctacactcgtg
gaggtactggagggagttgtccatctcccagagactgtgcacacagctgtgcgctacacc
agcattgagttggttggtgaaatgagtgaagtggtggaccgaaatcctcagtttctggat
cctgtattgggctatttgatgaaaggcctgtgtgaaaagcctctggcttctgctgcagcc
aaagccattcataacatttgttccgtttgtcgggatcatatggctcagcactttaatgga
ctcctagaaattgcccactcccttgattctttcatgttgtctcctgaagccgctgtgggt
ttgctaaaaggaacagctcttgtcctagcaagactacctttggataagatcactgaatgt
cttagtgagttatgttctgttcaggttatggcattgaaaaagctgttgtctcaggagccc
agcaatggcatttcttcagatcccactgtcttcttagatcgcctggcagtaatatttaga
cacaccaatcctattgtagaaaatggacagactcatccatgccaaaaagtcatccaggaa
atatggccagttttgtctgagactctgaataagcatcgagctgacaatcggattgtagag
cgttgttgtagatgcctgcgctttgcggttcgctgtgtaggcaaaggatctgcagccctg
ttacagccactagtcacacagatggtgaatgtgtaccatgtacatcagcattcctgtttc
ctgtatcttggcagtatacttgtggatgagtacggcatggaggaaggctgtcggcaggga
ttattagacatgctccaggcgctatgcattcccacctttcagctcctagaacagcagaat
ggcctccagaatcaccccgacactgtagatgacctgttcaggttagccacccgatttatt
cagcgaagccctgtcaccttgctgaggagccaggtggttatcccgatcttacagtgggcc
atcgcgtctaccaccttggatcaccgagatgccaattccagtgtcatgaggttcctgcga
gacctcatccacacaggagtagcaaatgatcatgaagaagactttgaagtgcggaaggaa
ctaattggacaggtgatggaccagcttgggcagcagcttgtaagccagttgctacacacg
tgctgcttctgccttcccccttacaccctacccgatgtggctgaagtgctctgggagatc
atgcaggttgacagaccgactttctgtcggtggctagagaattccttgaaaggtttgcca
aaggagacaacggtgggagctgtcacagtgacacataaacaacttacagatttccacaag
caagtcactagtgctgaggaatgtaagcaagtttgctgggccttgcgagacttcaccagg
ttgtttcgatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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