KEGG   Rattus norvegicus (rat): 296988
Entry
296988            CDS       T01003                                 
Symbol
Mkrn1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1 isoform 2
  KO
K15687  E3 ubiquitin-protein ligase makorin [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    296988 (Mkrn1)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     296988 (Mkrn1)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    296988 (Mkrn1)
SSDB
Motif
Pfam: zf-CCCH_4 zf_CCCH_4 zf-CCCH Torus zf-CCCH_2 zf-RING_UBOX zf-CCCH_3 zf-C3HC4 zf-RING_2 zf-rbx1 zf-RING_5 zf-C3HC4_4 zf-ANAPC11 zf-C3HC4_2
Other DBs
NCBI-GeneID: 296988
NCBI-ProteinID: NP_001004233
RGD: 1303251
Ensembl: ENSRNOG00000009280
UniProt: Q68FR1
Position
4:complement(69142710..69170211)
AA seq 329 aa
MAEAAAPGTTATTSGAGAAAAAVAAASLTSIPTVAAPSPGAGGGGGGSDGSGGGWTKQVT
CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHSKPLKQEEVTAT
DLSAKPSPAASSSLPSGVGSLAEMNPGEAESRNPNFPTVGAGSEDWVNAIEFVPGQPYCG
RTAPSCTEVPLQGSVTKEESEKEPTTVETEKQLCPYAAVGECRYGENCVYLHGDSCDMCG
LQVLHPMDAAQRSQHIKSCIEAHEKDMELSFAVQRSKDMVCGICMEVVYEKANPSERRFG
ILSNCNHTYCLKCIRKWRSAKQFESKIIK
NT seq 990 nt   +upstreamnt  +downstreamnt
atggcggaggctgcggctcccggaacaacagccacaacatcaggagcaggagcggcagcg
gcggcggtggcagcggcctccctcacctctatccccacagtcgctgccccgtccccgggg
gcgggaggagggggcggcggcagcgacggcagcggcggcggctggacgaaacaggtcacc
tgcagatattttatgcatggggtttgtaaggaaggagataactgtcgatactctcatgac
ctctctgacagtccatatggtgtagtgtgcaagtattttcaaagagggtactgtgtttat
ggagaccgctgcagatacgaacacagcaagccactgaaacaggaagaagtgactgctaca
gacctgagtgcaaagccatcccctgctgcttcctcaagtctcccttctggtgttggatca
cttgctgaaatgaatccaggcgaagctgagtcacgaaacccaaactttccaactgtagga
gcgggttcagaggactgggtgaatgccattgagtttgtccctgggcagccctactgtggc
cgtactgccccttcctgcactgaagtgcccctgcagggctcagtgaccaaggaagagtca
gagaaggagccaactacggtggagacagagaagcagctttgcccctatgctgcagtggga
gagtgtcgctatggggaaaactgtgtgtatctccacggagactcctgtgacatgtgtggc
ctgcaggtcctacacccaatggatgctgcccagaggtcacagcacataaaatcgtgcatt
gaggcccatgagaaggacatggagctctcttttgctgttcagcgcagcaaggacatggtg
tgtgggatctgcatggaggtggtctatgagaaagccaaccccagcgagcgtcgttttggg
atcctctccaactgcaaccacacctactgtctcaagtgtattcgcaagtggagaagtgct
aaacaatttgagagcaagatcataaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (22)   
   RefSeq(nuc) (8)   
   GenBank (7)   
   EMBL (7)   
Protein domain (14)   
   Pfam (14)   
All databases (56)   

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