KEGG   Rattus norvegicus (rat): 29705
Entry
29705             CDS       T01003                                 
Symbol
Gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1 precursor
  KO
K05175  gamma-aminobutyric acid receptor subunit alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04080  Neuroactive ligand-receptor interaction
rno04723  Retrograde endocannabinoid signaling
rno04727  GABAergic synapse
rno04742  Taste transduction
rno05032  Morphine addiction
rno05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    29705 (Gabra1)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    29705 (Gabra1)
   04723 Retrograde endocannabinoid signaling
    29705 (Gabra1)
  09157 Sensory system
   04742 Taste transduction
    29705 (Gabra1)
 09160 Human Diseases
  09165 Substance dependence
   05032 Morphine addiction
    29705 (Gabra1)
   05033 Nicotine addiction
    29705 (Gabra1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    29705 (Gabra1)
Ion channels [BR:rno04040]
 Ligand-gated channels
  GABA-A
   29705 (Gabra1)
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb
Other DBs
NCBI-GeneID: 29705
NCBI-ProteinID: NP_899155
RGD: 61855
Ensembl: ENSRNOG00000003512
UniProt: P62813 A6HDL5
Structure
Position
10:complement(27096731..27152563)
AA seq 455 aa
MKKSRGLSDYLWAWTLILSTLSGRSYGQPSQDELKDNTTVFTRILDRLLDGYDNRLRPGL
GERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASKI
WTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACP
LKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMT
THFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISAR
NSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPL
IKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKIDR
LSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgaagaaaagtcggggtctctctgactatctttgggcctggaccctcattctgagcact
ctctcgggaagaagctatggacagccctcccaagatgaacttaaggacaacaccactgtc
ttcacgaggattttggaccgactgctggatggttatgacaatcgtctgagaccaggcttg
ggagagcgtgtaactgaagtgaagacggacatctttgtcaccagtttcggacccgtgtca
gaccacgatatggaatatacaatagatgtgtttttccgccaaagctggaaggatgaaaga
ttaaaattcaaaggacccatgacagtgctccggctgaacaacctgatggccagtaaaatc
tggactccagatacatttttccacaatggaaaaaagtctgtggcccacaacatgaccatg
cccaataaactcctgcgtatcacagaggatggcacactgctgtacaccatgaggttgact
gtgagagccgaatgccccatgcacttagaagactttcccatggatgcccatgcctgccca
ctaaaatttgggagctatgcttatacaagagcagaagttgtctatgagtggacaagggag
ccagcccgctcagtggttgtggcagaagatgggtcacgtttaaaccagtatgaccttctt
gggcaaacagttgactctggaattgttcagtccagtactggagaatatgtggttatgacg
actcactttcacttgaagagaaaaatcggctactttgttattcaaacatatctgccatgc
ataatgacagtcattctctcccaagtctccttctggcttaacagagagtcagtaccagca
agaactgtctttggagtgacgaccgttctgaccatgacaaccttgagtatcagtgccaga
aattccctcccaaaggtggcttatgcaacggccatggactggtttattgcagtgtgctat
gccttcgtgttctcggctctgattgagtttgccacagtaaactatttcaccaagagaggg
tatgcgtgggatggcaaaagcgtggttccagaaaagccaaagaaagtgaaggatcctctc
attaagaaaaacaacacatatgctcctacagcaaccagctatacccctaacttagccagg
ggtgaccccggcttggcaactattgctaaaagtgcgaccatagaaccgaaagaagtcaag
cctgagacaaaaccgccagaacccaagaaaacctttaacagcgtcagcaaaatcgaccga
ctgtcaagaatagcctttccgctgctatttggaatctttaacttagtctattgggccacg
tatttaaacagagagcctcagctaaaagcccccacaccccatcaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (17)   
   RefSeq(nuc) (3)   
   GenBank (7)   
   EMBL (7)   
3D Structure (2)   
   PDB (2)   
Protein domain (2)   
   Pfam (2)   
All databases (42)   

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