KEGG   Rattus norvegicus (rat): 29707
Entry
29707             CDS       T01003                                 
Symbol
Gabra5
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5 precursor
  KO
K05175  gamma-aminobutyric acid receptor subunit alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04080  Neuroactive ligand-receptor interaction
rno04723  Retrograde endocannabinoid signaling
rno04727  GABAergic synapse
rno04742  Taste transduction
rno05032  Morphine addiction
rno05033  Nicotine addiction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    29707 (Gabra5)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    29707 (Gabra5)
   04723 Retrograde endocannabinoid signaling
    29707 (Gabra5)
  09157 Sensory system
   04742 Taste transduction
    29707 (Gabra5)
 09160 Human Diseases
  09165 Substance dependence
   05032 Morphine addiction
    29707 (Gabra5)
   05033 Nicotine addiction
    29707 (Gabra5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    29707 (Gabra5)
Ion channels [BR:rno04040]
 Ligand-gated channels
  GABA-A
   29707 (Gabra5)
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb CytochromB561_N
Other DBs
NCBI-GeneID: 29707
NCBI-ProteinID: NP_058991
RGD: 61859
Ensembl: ENSRNOG00000010803
UniProt: P19969
Position
1:complement(117404446..117517424)
AA seq 464 aa
MDNGMLSRFIMTKTLLVFCISMTLSSHFGFSQMPTSSVQDETNDNITIFTRILDGLLDGY
DNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQRLPL
NNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQLEDF
PMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLMGQTVGTENISTS
TGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKKALEAA
KIKKKERELILNKSTNAFTTGKLTHPPNIPKEQLPGGTGNAVGTASIRASEEKTSESKKT
YNSISKIDKMSRIVFPILFGTFNLVYWATYLNREPVIKGATSPK
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggacaatggaatgctctctagatttatcatgaccaaaaccctccttgtcttctgcatt
tccatgaccttatccagtcactttggcttttcacaaatgccaactagttctgtacaagac
gagaccaatgacaacatcacaatattcaccaggatcttggacgggctcttggatggctat
gacaacagactgcggcctgggctgggagagcgaatcacgcaggtgcgaacagacatctat
gttaccagctttggcccagtgtccgacacggaaatggaatataccatagatgtgtttttc
cgacaaagctggaaagatgaaaggctgcggtttaaggggcctatgcaacgtctccctctc
aacaaccttcttgccagcaaaatctggaccccagacacattcttccacaatgggaagaag
tccattgcgcacaacatgacgacacccaacaagctgctgaggctggaggatgatggcaca
cttctctacaccatgcgcctgacgatctctgctgagtgtccaatgcagcttgaggacttc
ccgatggatgcccatgcttgtcccctgaaatttggcagttatgcttaccctaattcggaa
gttgtctatgtttggaccaatggttccaccaagtctgtggtggtggcagaagatggctcc
agactcaaccagtaccacctcatggggcagacagtaggcactgagaacatcagcaccagc
acaggtgaatatacaatcatgactgctcattttcacctgaagaggaagatcgggtacttt
gtcatccagacgtaccttccctgcatcatgactgtcatcttatcccaggtgtctttttgg
cttaatcgagaatctgtcccagctaggacagtttttggagtgaccacagtgctgaccatg
acaaccctcagcatcagtgcccggaattcgctgcccaaagtggcctatgccacagccatg
gactggttcattgctgtctgctatgcatttgtcttctctgccctgattgaatttgccaca
gtcaactactttacaaagagaggatgggcctgggatggcaagaaggccttggaagcagct
aaaatcaagaaaaaagaacgtgaactcatactaaataagtcaacaaatgcttttacaact
gggaagttgacccatcctccaaacatcccaaaggagcagcttccaggcgggactgggaat
gctgtgggtacagcctcaatcagagcatctgaggagaagacttctgagagtaaaaagacc
tacaacagcatcagcaagatcgacaaaatgtcccggattgtgttccccattttgtttggc
actttcaatctagtttactgggcaacatatttgaatagggagcccgtgataaaaggggct
acctctccaaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (11)   
   RefSeq(nuc) (7)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (38)   

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