KEGG   Rattus norvegicus (rat): 297113
Entry
297113            CDS       T01003                                 
Symbol
Gars1
Name
(RefSeq) glycine--tRNA ligase
  KO
K01880  glycyl-tRNA synthetase [EC:6.1.1.14]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    297113 (Gars1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rno01007]
    297113 (Gars1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    297113 (Gars1)
   03029 Mitochondrial biogenesis [BR:rno03029]
    297113 (Gars1)
Enzymes [BR:rno01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.14  glycine---tRNA ligase
     297113 (Gars1)
Amino acid related enzymes [BR:rno01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   297113 (Gars1)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    297113 (Gars1)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    297113 (Gars1)
SSDB
Motif
Pfam: HGTP_anticodon tRNA-synt_2b WHEP-TRS
Other DBs
NCBI-GeneID: 297113
NCBI-ProteinID: NP_001258068
RGD: 1307856
Ensembl: ENSRNOG00000011052
UniProt: Q5I0G4
Position
4:85484939..85542876
AA seq 728 aa
MPCLLPTLLRATRAALLLQSPRVVAAPASQRLLSAPAQPAASPSSMDSAEELLAPLRLAV
RQQGDFVRKLKEDKAPQVDVDRAVAELKARKRVLEAKELALQPKDDIVDRAKMEDTLKRR
FFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKT
SGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSAEKKSEMESVLAQLDNYGQ
QELADLFVNYNVKSPTTGNDLSPPVPFNLMFQTFIGPGGNMPGYLRPETAQGIFLNFKRL
LEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPTEKDHPKFPSVADL
YLYLYSAKAQVTGQSARKMRLGDAVEQGVINNSVLGYFIGRIYLYLTKVGISPDKLRFRQ
HMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPLVAEKPLKEPKT
VNVVQFEPNKGAVGKAYKKDAKLVLEYLGACDECYITEMELLLSEKGEFTIETEGKTFQL
TKDMVSVKRFQKTLHVEEVVPSVIEPSFGLGRIMYTILEHTFHVREGDEQRTFFSFPAVV
APFKCSVLPLSQNQEFMPFVKELSEALTRNGVSHKVDDSSGSIGRRYARTDEIGVAFGIT
IDFDTVNKTPHTATLRDRDSMRQIRAEVSELPSVVRDLANGNITWADVEARYPLFEGQET
GKKETVEE
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgccctgtctgctccccacgctgctcagagccacccgcgccgcgctgctcctacagtcg
ccccgagtggtcgcagcgcccgcgtctcagcggctcctcagcgctcccgcgcagcccgcc
gcctctccgagcagcatggacagcgccgaggagctgctagccccattgcggctagctgtg
cgccagcagggagactttgtacggaagttaaaagaagataaagccccacaagtggatgtg
gacagagcagtagctgagctcaaggcccggaagagggttctggaagcaaaggagctggcg
ttgcagcccaaagatgacatcgtagatagagcaaaaatggaggatactttgaagaggaga
tttttctacgatcaagcttttgctatttatggaggtgtcagtggtttgtatgactttggg
ccagtgggatgtgctttgaagaacaatatcatccagacctggaggcagcactttatccaa
gaggaacagatcctggaaattgactgcaccatgctcacccccgagccagttttaaagacc
tctggccatgtagacaaatttgctgacttcatggtgaaggacgtgaagaacggagagtgc
ttccgcgcggaccacctgttgaaagctcatttacagaaactgatgtcagataagaagtgc
tctgctgagaagaaatcagagatggaaagtgtcttggcccagcttgataactatggacaa
caagaactggcggatctttttgtgaactataatgtaaaatctcccaccactggcaatgac
ctgtcccctccggtaccttttaacttaatgttccagaccttcattgggcctggaggaaac
atgcctggatatctgagaccagaaactgcacagggaattttcctaaatttcaaacgactt
ttggaattcaaccaagggaagttgccttttgctgctgcacagattggaaactcctttaga
aatgagatctcgccccggtctggactgatccgagtcagggaattcacaatggcagagatc
gagcactttgtagatcccactgagaaagaccatcccaagttcccgagcgtggccgacctc
tacctttatttgtactctgccaaagcccaggtcactggacagtctgctcgcaagatgcgt
ctgggagatgctgttgaacagggtgtgattaacaactcagtattaggctattttattggc
cgcatctacctctacctcacgaaggttggaatatctcctgataaactccgcttccgacag
catatggagaatgagatggcccattatgcctgcgactgctgggatgctgagtccaaaacg
tcctatggctggatcgagattgttggatgtgctgaccgatcctgctatgacctctcctgt
catgctcgagccaccaaagtcccgctggtggctgagaagcccctgaaagagcccaaaaca
gttaacgttgtacagtttgagcccaacaagggagccgtgggcaaggcgtacaagaaagat
gcaaagctggtgctggagtacctcggcgcctgcgatgagtgctacattaccgagatggag
ctgctgctgagcgagaaaggggaattcactattgaaactgaaggaaaaacatttcagtta
acaaaagacatggtcagtgtgaagagattccagaaaacactacacgtggaagaagttgtt
ccgagtgtaattgagccctcttttggcctgggcaggatcatgtataccatattggaacat
acattccacgtccgggagggagatgagcagagaacgttcttcagtttccctgctgtggtt
gctccattcaaatgttctgtccttccactgagccaaaaccaagagtttatgccatttgtc
aaggaattatcggaagctctgactcgaaatggcgtgtctcataaagttgacgattcctct
gggtctattggaaggcgctatgcaagaactgatgagattggcgtggcgtttggcatcacc
attgactttgatacagtgaacaagaccccccacactgcaactctgagggaccgagactcc
atgagacagataagggcagaggtctctgaactgcccagtgtggtccgtgatctggccaat
ggcaacatcacttgggctgatgtggaggccaggtaccccctctttgaagggcaagagact
ggcaagaaggagacagtggaagaatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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