KEGG   Rattus norvegicus (rat): 297380
Entry
297380            CDS       T01003                                 
Symbol
Ccdc142
Name
(RefSeq) coiled-coil domain-containing protein 142 isoform X1
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: CCDC142 DUF4594
Other DBs
NCBI-GeneID: 297380
NCBI-ProteinID: XP_008761307
RGD: 1561779
Ensembl: ENSRNOG00000058785
UniProt: A0A0G2KB94
Position
4:117164055..117172286
AA seq 734 aa
MARASRSSGLLPPITNVPPSWAQPLGDGEERGKGKRGGLELLAAMSAPCPDSGRQPWAPE
SASGPMPFALQRLRAELLRLHREREQLLRARDCARHLQAVVRLLRSGSSAGSFSLQQLHG
DLQMCPSRRAAQRLGFPGSRETLLLARPVGLAAQHLDANIEMQLRTLGRAPASLGLTSQL
AELLLALPFYHTLQGQSLSFVPGAARPFPAARVLHLLAAERGCQVADRLAEALGRSGLQD
QLRRQCDQERELLPGLLGLIGGVASRDSSGLRLGGPGALWSQYWTMLWAACAQSLDLRVG
PWGDPKAVAQQLSQALCQASLPQECEKELLSLCHSLFHRSLVCSWDQGFCQALGSAVGGQ
SSPASPSTAELLQRLFPPLLDILRQPRPELSLCQPAGPTPVALGLCTLQTTLLWFLGKAQ
QHLAAWAPGPFLLLIQKDLPPLLHAVEALSSLASEAAFSLEVEQQLGLEIQKLTARMQLL
PKESLSLFFQECHKQATQGFKLHMPRGGYWRLRLCPEHPSDPSEYARVVVYTVLEPVLQG
LRGLPPEAQAPALSQALTATLGAWLDHILTHGIRFSLQGALQLKQDFGVVREVLEQEQWG
LSPELRQTLLSLSIFQQLDGALLCLLQQPLPKNPVQRRPHRCCFCNEVQTIELPTSSLNS
LESLAPPLRPGVSPAQNTHLLSTLGGGGRGGGGGGPSPEAYLAGNQQAWLALRLHQHPRW
HLPFFSCLGTSPEP
NT seq 2205 nt   +upstreamnt  +downstreamnt
atggcccgggcgtcccgctctagtggccttctaccgccaatcactaacgtacccccgtcg
tgggcgcagcccctgggcgatggggaggagcggggcaaagggaagcgcggagggctggag
ctactggctgcaatgagcgccccgtgcccggactccggcagacagccctgggctccagag
tctgcaagcggcccgatgcccttcgctctgcagcggctccgggccgagttgctgcgtctg
caccgcgagcgagagcagctcctgagggcccgggactgcgcccgccacctgcaggcggtc
gtgcggctactccgctccggctcctcggccggttccttctccctgcagcagctgcacggc
gacttacagatgtgcccttcgcgtagggcggctcagcgccttggtttcccgggctccagg
gagacgcttcttctggctcgccctgttgggctagctgcgcagcacctggatgctaacatc
gagatgcagcttcgcaccctaggccgggcaccggctagcctgggcctgacgtcccaacta
gccgaactgttgctggcccttcccttctaccacactctacagggacaatccctgagcttc
gtccccggggccgcgcgcccattccccgcggcccgtgtgctccacctcctggctgcagag
cggggttgtcaggtggcggatagactggctgaagcccttggcagatcgggcttgcaggac
cagctccgtcggcagtgcgaccaagagcgagagctgctgcccgggctgctgggcctaata
gggggcgtggctagtagagacagcagtggactgaggcttggagggcctggagccctgtgg
agccagtattggaccatgctgtgggcagcctgtgctcagagtttggacttacgcgtggga
ccctggggcgaccccaaagcagtggcacaacagctgagtcaggcactgtgtcaagcatcc
ctgcctcaggagtgtgagaaggagctgttgtctttgtgtcacagcctatttcatcggtct
ctagtctgcagctgggaccaagggttctgccaggccttgggatcagccgtgggtggtcag
agcagccccgcttcaccatccactgctgagctgttgcagcggcttttccctcccctcttg
gatatccttcgccagcctaggccagaacttagcctgtgccagcctgcaggtcctacgcct
gtcgctctgggactctgtaccctgcagaccaccttgctctggttcttgggcaaagctcag
cagcacctggcagcatgggcgcctggtcccttcctactcctgatccagaaggacttgcct
cctcttctgcatgcagtggaagcgctgtccagcctggcctccgaggcagccttcagtctg
gaggtggagcagcagctgggtctggagatccagaagctgactgctaggatgcagctcctg
cccaaagagtcgctgagtctttttttccaagaatgtcataagcaagccacacaaggcttc
aagctccacatgccaaggggtggatactggaggcttcgactgtgtcctgaacatcccagt
gaccccagtgagtacgctagggtggtggtctacactgtgttggagcccgtgttgcaagga
cttcgaggattgccacccgaagcccaagcccctgccctcagccaggcactgacagccaca
ctgggcgcctggcttgaccacatccttacccatgggatccggttcagcctgcagggggcg
ctgcagctcaaacaagacttcggagtggtcagagaggttctggaacaggagcagtggggc
ctgtccccggagcttcgccagactctgctctcactcagcatcttccagcagctggatggg
gccctgctgtgtcttctgcagcaacccctgcccaagaatccagtccagagaagacctcac
cgttgctgtttttgtaatgaggtccagaccattgaactgcccaccagcagcctcaacagc
ctggaaagtctggcaccccctctaaggcctggagtctccccagcccagaatactcacctg
ctaagcaccctggggggaggagggcgagggggagggggaggaggacctagtcctgaggct
tacctggctggaaaccagcaagcctggcttgccctgaggctgcaccaacaccctcgttgg
cacctgccttttttctcttgcctagggacaagtcctgaaccctaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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