KEGG   Rattus norvegicus (rat): 29745
Entry
29745             CDS       T01003                                 
Symbol
Sema4f
Name
(RefSeq) semaphorin-4F precursor
  KO
K06521  semaphorin 4
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    29745 (Sema4f)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:rno04090]
    29745 (Sema4f)
CD molecules [BR:rno04090]
 Proteins
  29745 (Sema4f)
SSDB
Motif
Pfam: Sema4F_C Sema PSI
Other DBs
NCBI-GeneID: 29745
NCBI-ProteinID: NP_062145
RGD: 3658
Ensembl: ENSRNOG00000006784
UniProt: Q9Z143 A6IAI3
Position
4:complement(116969137..116995442)
AA seq 776 aa
MLARAERPRPGPRPPPVFPFPPPLSLLLLLAILSAPVCGRVPRSVPRTSLPISEADSYLT
RFAASHTYNYSALLVDPASHTLYVGARDSIFALTLPFSGERPRRIDWMVPETHRQNCRKK
GKKEDECHNFIQILAIVNASHLLTCGTFAFDPKCGVIDVSSFQQVERLESGRGKCPFEPA
QRSAAVMAGGVLYTATVKNFLGTEPIISRAVGRAEDWIRTETLSSWLNAPAFVAAMVLSP
AEWGDEDGDDEIFFFFTETSRVLDSYERIKVPRVARVCAGDLGGRKTLQQRWTTFLKADL
LCPGPEHGRASGVLQAMAELRPQPGAGTPIFYGIFSSQWEGAAISAVCAFRPQDIRAVLN
GPFRELKHDCNRGLPVMDNEVPQPRPGECIANNMKLQQFGSSLSLPDRVLTFIRDHPLMD
RPVFPADGRPLLVTTDTAYLRVVAHRVTSLSGKEYDVLYLGTEDGHLHRAVRIGAQLSVL
EDLALFPEPQPVESMKLYHDWLLVGSHTEVTQVNTSNCGRLQSCSECILAQDPVCAWSFR
LDACVAHAGEHRGMVQDIESADVSSLCPKEPGEHPVVFEVPVATVGHVVLPCSPSSAWAS
CVWHQPSGVTALTPRRDGLEVVVTPGAMGAYACECQEGGAARVVAAYSLVWGSQRGPSNR
AHTVVGAGLVGFLLGVLAASLTLLLIGRRQQRRRQRELLARDKVGLDLGAPPSGTTSYSQ
DPPSPSPEDERLPLALGKRGSGFGGFPPPFLLDSCPSPAHIRLTGAPLATCDETSI
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgcttgccagggccgagcggccccgcccgggcccccggccgcctccggtctttcccttc
ccgccgccgctgtcgctgctgctgctgctggcgatactaagcgccccggtgtgcggccgc
gtcccccgctcagtgcccagaacctcgctgcccatctccgaggctgactcctatctcacc
cggtttgcagcgtctcatacgtacaattactctgctctccttgtggatcctgcctcccac
acactttacgtcggtgcacgggatagcatcttcgctttaaccctccccttctctggggaa
agaccccgaaggatcgactggatggtacctgagactcacagacagaactgcaggaagaaa
ggcaagaaagaggacgaatgtcacaattttatccagattctcgccattgtcaatgcctct
cacctcctcacgtgcggcaccttcgcttttgatccgaagtgcggggttattgatgtgtcc
agtttccagcaggttgaaagacttgagagcggccgggggaaatgtccttttgagccagct
caacggtcagcagctgtaatggctgggggcgtcctctacaccgccactgtgaagaacttc
ctggggactgagcccatcatctcccgagctgtgggtcgagctgaggactggattcgaaca
gagaccttgtcatcctggcttaatgctccagcctttgtcgcagctatggtcctgagccca
gctgagtggggggatgaagatggagacgatgaaatcttttttttcttcacggagacctcc
cgagtgttggactcctatgagcgcatcaaggtcccaagagtggcccgagtgtgtgcgggg
gaccttgggggcaggaagacccttcagcagagatggacgacgtttctgaaggctgacctg
ctgtgcccagggcccgagcatggccgggcctccggggttctgcaggctatggcagagctt
cggcctcagcctggagcgggaacccccatcttttatgggatcttttcctcccagtgggaa
ggagctgccatctctgctgtgtgtgccttccgaccccaagacatccgggcagtgctgaat
ggtccctttagagagctaaaacatgactgcaacaggggactgcctgtcatggacaacgag
gtgccccagcccagacctggagagtgcatcgccaacaacatgaagctccagcagtttgga
tcctcactctccctgccagaccgcgtgctcacctttatcagagaccaccctctcatggac
aggcccgtgttcccggctgacggccgccccctgctggtcactacagatacagcctatctc
agagtcgtggcccacagggtgaccagcctctcagggaaagaatatgacgtgctctacctg
gggacagaggatggacacctccaccgggctgtgcgcattggagctcagctcagtgtcttg
gaggatctggccttgttcccagaaccacagccggttgagagcatgaaattgtaccacgat
tggctcctggtgggctcccatactgaggtgacacaagtgaacaccagcaactgtggccgt
ctccagagctgctcggagtgtatcctggcccaggaccccgtgtgcgcctggagcttccgg
cttgatgcttgtgtggcccacgccggcgagcaccgcgggatggttcaagatatagagtca
gcggatgtctcttctttgtgtccaaaagaacctggagaacatcccgtagtgtttgaagtt
ccggtggctactgtgggccacgtggtcctgccatgttcccccagttctgcctgggcatcc
tgtgtgtggcaccagcccagtggagtgactgcgctcactccccggagggatggactagag
gtggtggtgaccccaggggccatgggggcttatgcttgcgagtgtcaggagggtggagcc
gcccgcgtggtggctgcttatagcttggtgtggggcagccagcggggaccctcaaaccgg
gcccacaccgttgtgggggctggattggttggctttctcctgggtgttcttgcagcatcc
ctcactctcctcctgattggtcgccgtcagcagcgtcggcgacagagggagcttctagct
agagacaaggtgggcttagatctgggggctccaccttctgggaccacaagctatagtcag
gaccctccctctccttcgcctgaagatgaacggctgcccctggccctgggtaagcggggc
agtggttttggtggcttccctccacccttcctgctggattcttgcccaagcccagcccac
atccggctcactggggcgcctctagccacgtgtgatgagacctccatctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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