KEGG   Rattus norvegicus (rat): 297458
Entry
297458            CDS       T01003                                 
Symbol
Ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
  KO
K25178  coiled-coil domain-containing protein 174
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    297458 (Ccdc174)
   03041 Spliceosome [BR:rno03041]
    297458 (Ccdc174)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     297458 (Ccdc174)
Spliceosome [BR:rno03041]
 Complex C
  Other components
   EJC/TREX
    297458 (Ccdc174)
SSDB
Motif
Pfam: DUF4078
Other DBs
NCBI-GeneID: 297458
NCBI-ProteinID: NP_001009659
RGD: 1305225
Ensembl: ENSRNOG00000010090
UniProt: Q5PQS7 A6IBB3 G3V7A6
Position
4:125949203..125976179
AA seq 474 aa
MDRKKKPLDVTASSLVDLKAELFRKQEEFKQEKLLKDSGVFGKPKTSNKKPSIWSKQNAG
VSSRAEKDAEQKLEEQKTLDKSREKLEEKAKLYEKMTKGDFLDEEVEDMYLVDFTQKIID
KRKEMEVLGATRDSRIKEERDAAVAAANDDDDEEEFSEKDIPPPQDPSEEWVDYVDSLGR
SRRCMRKDLPSLLEMDKNLQGRLFVSPANEKTLLSEDMRKELQRQQWEEEEREALKKPMG
PIHYEDIRENEARQLGVGYFAFARDKELRNKQMKTLEMLREQTTDQRIKRENIKEKRKAI
LEARLAKLRQKKMKKSKEDGTEEESRADGVVTEPSEPKSVPAPPPVAQSSKVEVIIQERK
DSKPGVPHIREWDRGKDFSFGFWSKKQSELRAERDPEFAPPSNYFVGQKRTGSLSSQPWS
RPGAAPSDLGHSSGQSQEPSSSHTSTPASESSPQAPTVTFQTLDDMISYYKQVT
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggatcgaaagaaaaagcctttggacgttacagcctcctcgttggtagatcttaaggct
gagcttttccgaaaacaagaagaattcaaacaagaaaaacttctaaaagattctggagtt
tttggaaaaccaaagacatctaataagaagccaagtatctggagcaaacaaaatgcaggt
gtttccagtcgagcagagaaggacgctgaacagaagcttgaggagcagaagactttagac
aaatcaagggaaaaattggaagaaaaggccaaattatatgaaaagatgactaaaggagat
tttctagatgaggaagtggaggacatgtaccttgtggatttcacacagaaaatcatagac
aagcgaaaagaaatggaggtgcttggtgccactagagattcccgaatcaaagaagagaga
gatgctgctgttgctgctgctaatgatgatgatgatgaagaagagttttctgaaaaagac
atacctccccctcaagaccccagtgaggaatgggtggattatgtggactctttgggccga
tcccggcgctgcatgagaaaggatttaccaagtctattggagatggataaaaatcttcag
gggagactttttgttagtcctgctaatgaaaagactttgttatctgaagacatgaggaaa
gaacttcagcgccaacaatgggaggaagaagaaagggaggctttgaaaaaaccaatgggg
cccatccactatgaagacattcgggaaaatgaggcccggcaacttggtgttgggtatttt
gcctttgcccgagacaaagagttgagaaacaagcaaatgaaaactttagagatgcttcgt
gagcagacaacagatcagagaataaaacgagaaaacataaaggaaaagcgaaaagctatc
ttagaagcaagacttgccaagcttcgacaaaaaaagatgaaaaagtcaaaggaggatggg
actgaagaggaaagcagagcagatggagttgttactgagccctcagaaccaaagtctgta
cctgctccacctcctgtggcccagagcagcaaggtggaagtcatcatccaggagaggaag
gacagcaagcctggagtgccacacatccgagagtgggaccgagggaaagacttttccttt
ggattctggtcgaagaagcagtcagaactccgggctgagcgagatcctgagtttgcccca
ccttcaaattactttgtgggtcaaaagagaactggttctttgagtagccagccatggagc
agaccaggagcagcaccaagtgacttggggcattcctctggccagagccaggaacccagc
tcttcacacacatccactcctgcctctgaaagctcaccacaagcacccacagtcactttc
caaacactagatgatatgatatcttattataaacaagtcacatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (36)   

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