KEGG   Rattus norvegicus (rat): 297483
Entry
297483            CDS       T01003                                 
Symbol
Shq1
Name
(RefSeq) protein SHQ1 homolog
  KO
K14764  protein SHQ1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    297483 (Shq1)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Sno RNPs
   Box H/ACA snoRNPs
    297483 (Shq1)
SSDB
Motif
Pfam: SHQ1 SHQ1-like_CS
Other DBs
NCBI-GeneID: 297483
NCBI-ProteinID: NP_001128185
RGD: 1310610
Ensembl: ENSRNOG00000005433
UniProt: B4F784
Position
4:complement(134741190..134861960)
AA seq 603 aa
MLTPAFELTQDRDFLTVAIRVPHARASEFDVYFEGVDFKFYAKPYFLRLTLPGRIVENGS
EQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPRKSRSAKPLVEEIGASGVSEEGA
DDEDEEFDWEIEQTPYEEVSESTLRSQCHYGFGNLRAGVVQRLQDELSEVIDIKDPDFTP
VTERRQKRLAAELAKFDPDHYLADFFEDEAVEQVLKYSPWWNDVHTEMMASLGKSQEQGD
AAALVSFSEEEKYQLRKFVNKSYLLDKTAHRQVYYSLVDILLAYCYEVRVTEGEHNVESA
WTIRKLSPTLCWFETWTDVHEILVSFGRRVLCYPLYRHFKLVLKAYRDTLKILQLGKSAV
LKCLLDVHKIFQENDPAYILNDLYISDYCVWIQKAKSKKLAALTEALEAVSLSKAQLGFE
LLELEAAAILVQEEETAGKTAQCSPTEQVPHSSPEPSDSDSTSSSDTEDSASVQEELVGT
QPSLLTSLQVPLLEEDSALTIRDSGLCRNMGSQKCEVRQGQPLASPRAPLIEEVGDSGLC
RNMASQGCEVSQEQPLASPRAPLIEEVGDELKTMLWVSTPSGVNAGSHRSVQDAKERDQV
PCD
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgctaactcctgcgttcgaactgacccaggaccgcgacttccttaccgtcgccatccgc
gtgccccacgcgcgcgcctccgagttcgacgtgtacttcgagggggtggacttcaagttc
tacgccaagccgtactttctgaggttaacacttcctggaaggattgtagaaaatggatct
gagcagggatcctatgatgcagataaaggaatttttaccattcgattgcccaaggaaact
cctggccagcattttgaggggctgaacatgttaactgcgcttctggcaccaagaaaatcc
aggtctgccaaaccgcttgtggaagaaataggtgcttccggggtttctgaggaaggagct
gatgatgaggatgaagagtttgactgggaaattgagcagactccctatgaagaggtctca
gaaagtactctgcgatcgcagtgtcactatggatttggaaacctgcgagcaggtgtggtt
cagcggttacaggatgaactgagtgaggttatcgatattaaggatccagatttcactcct
gtgactgaacggaggcagaaacgcctggccgctgaattggccaaatttgatccagatcat
tatctagctgacttctttgaagatgaggcagttgaacaggttttgaagtacagtccttgg
tggaacgatgtgcacacagaaatgatggcctctttgggaaagagccaagagcaaggggat
gctgctgccttagtatctttttcagaagaggaaaaataccagctacgaaagtttgtgaat
aaatcttacctgctggacaagacagctcaccgtcaagtgtactatagtttagttgacatc
cttctggcctattgctatgaagtacgtgtgactgaaggagagcacaacgtggagtctgcg
tggaccatcaggaagctgagccctacactctgctggtttgagacatggacagacgttcat
gaaatcctggtgtcttttggacggagagttttgtgctatccgctctatcgccatttcaag
ctggtgctgaaagcctacagagatactctaaagatactgcaactcggtaagagtgcagtt
ttgaagtgtctcctggatgttcacaaaatcttccaggaaaacgacccagcatatattttg
aatgatctctacatctcagactactgtgtatggattcagaaggccaagtccaaaaagttg
gctgccctaacagaagctttggaagcagtctcactcagtaaggcccagctgggattcgag
ctgctagaactggaagctgctgcaattcttgtccaggaggaagaaactgccggaaagaca
gcccagtgcagtcctacagagcaggttccacactccagccctgagcccagtgactcagac
agcacctcatcatctgacacagaagactcagcgtcagtgcaagaggagcttgtcgggacc
cagccctccctgctcacttctctgcaagtcccccttttggaagaggacagtgccctgacc
atcagagatagtgggctctgcagaaacatgggcagtcagaaatgtgaagttcgtcaaggt
cagccactggcctctccccgggctcctctgatagaggaggttggagatagtggactctgc
agaaacatggccagccagggatgtgaagtcagtcaagagcagccactggcctctccccgg
gctcctctgatagaggaggttggagatgaactgaagaccatgctttgggtttccacaccc
agtggtgtcaatgctgggagccacaggagtgtacaggatgcaaaggagagggatcaggtg
ccctgtgattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (15)   
   UniProt (1)   
   RefSeq(pep) (14)   
DNA sequence (16)   
   RefSeq(nuc) (14)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (42)   

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