KEGG   Rattus norvegicus (rat): 297846
Entry
297846            CDS       T01003                                 
Symbol
Cntnap5c
Name
(RefSeq) contactin-associated protein like 5-4 isoform 1 precursor
  KO
K24338  contactin associated protein-like 5
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    297846 (Cntnap5c)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Laminin domain-containing proteins
  Laminin G domain-containing proteins
   297846 (Cntnap5c)
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 F5_F8_type_C EGF Laminin_G_3
Other DBs
NCBI-GeneID: 297846
NCBI-ProteinID: NP_001041331
RGD: 1566343
Ensembl: ENSRNOG00000029556
UniProt: Q0V8T3
Position
13:3521265..4553884
AA seq 1305 aa
MNSVRRLNSILTLVLSGLWHLGLTATNYNCDEPLASFLSPLAFFSSSDLNGRFSPPQLNW
RIGSGGWSPAVSNAHQWLQIDLGNRVEITAVATQGRYGSTDWVTSYRLMFSDTGHNWQQY
KQKDSIWTFVGNTNADGVVYHKLLHSMRARFVRFVPLEWNSNGKIGMRVEVYGCSYKSDI
VGFDGQSTLLYRFNQKTMSTLKDVISLKFKSMQGDGVLFHGEGQRGDHITLELQKGRLAL
YLNIDGSKARLSIIAPLAILGSLLDDQHWHSVLLERVGKQANFTVDRNTQHFQIKGETDA
LDIDYELSFGGIPVPSKPGTFLKKNFHGCIENVYYNGVNIIDLAKRRKHQIYSGNVTFSC
SEPEIVPITFVNSRSSYLLLPGIPQIHGLSVSFHFRTWNEDGLLLSTELSEGSGTLLLIL
DGGSLRLLIKKVARHGTEIITGSSLNDGLWHSVSINARRNRVTLTLDNDAASPALDTSQL
QIYSGNSYYFGGCPDNLTDSQCLNPIKAFQGCMRLIFIDNQPKDLISVQQGSMGNFSDLH
IDLCSIKDRCLPNYCEHGGHCAQNWTTFYCNCSDTGYTGATCHDSVYEQSCEVYRHKGHT
AGFFYVDSDGSGPLGPLQVYCNITEDKIWMTVQHNNTELTWVQISNAEKAYAMTFNYGGS
MEQLEALIDGSEHCEQEVTYYCRRSHLLKTPDGAPFTWWIGRSNKRHNYWEGSVPRVQQC
RCVHKENCLDIRSFCNCDADIGEWAKETGFLSFKDHLPVTQIITTDTNRSKSEAAWKIGP
LRCYGDRHFWNAVSFTTEASYLYFPTFHAEFSADISFFFKTTALSGVFLENLGIKDFLRL
EMSSPSEITFTIDVGNGPVELLIQSPYPLNDNQWHYIRAERNLKETSLQVDNLPQSMREA
SEEAYFRLHLTSQLFVGGTSSRQKGFLGCMRSLHLNGQNTDLIERAKLMSGVTPGCLGHC
SSYGSNCLNGGKCVEKQSGYSCDCTNSPNEGPFCQKEISALFNSGTSVTYLFQEPYLVIK
NTSLLSSPIYADTAPSKETIMLNFLTTQAPTILLYLNFSSQNFLAILLSRNGSLQICFRL
SKIESHVYTMNTENLANGRVHQVKINKDGPELSIQMDQQLFTYNFSPKVEFWTLKSLVLG
KVTETLGLDPEVAKVNILGFVGCLSSVQYNHIAPLKAALRHSGIAPVTVQGTLTESGCDS
TLDSDVNAVTTVHSSLDPIGKRDEREPLTDTVQSDSAVIGGIIALVTFVTFCVIGIMIHF
LYLHKQSHCTNQTKEKEYSENLSNSFRNAIDLQNTASECKREYFI
NT seq 3918 nt   +upstreamnt  +downstreamnt
atgaattctgtacggagactgaacagcattttgactttggttctttctggcttgtggcat
ttaggattaacagcgacaaattacaattgtgatgaaccattggcctccttcctctcacca
ctggcttttttcagctcctcagatctcaatggaagattcagcccacctcaactcaactgg
agaataggatctggtggttggtccccagcagtttccaatgcccatcagtggcttcagatt
gacctgggaaacagagtggagattacagcggtggctacacagggaagatatgggagcact
gactgggtgacaagctatcgcctgatgttcagtgatactgggcacaactggcaacagtac
aagcaaaaagacagcatctggacatttgtcggaaacacaaatgctgatggtgtggtttac
cacaagctgctgcactccatgagagcccgctttgttcgctttgtgcccctggaatggaat
tcaaatggaaagattggcatgagagtggaggtctatggatgctcctacaaatcagatatt
gttggctttgatggccagagcacgcttttgtatagattcaatcagaagacaatgagcacc
ctcaaagacgtgatttccctgaagttcaagagcatgcaaggagatggagttctattccac
ggagaaggacaacgtggagaccacattaccttggagttgcagaagggcaggctagcccta
tacctgaacatagatggcagcaaagcccggctcagcatcattgcacccttggccattctg
ggtagccttctggatgaccagcactggcactcggttctcctggagcgtgtgggcaagcag
gcaaacttcactgtggacaggaacacacagcacttccagatcaagggtgagaccgatgcc
ctggatattgattatgagctcagttttggaggaatcccagtaccaagcaaacctgggacc
tttttaaagaaaaacttccatggctgtattgaaaacgtttactacaatggagtgaacata
attgatttggctaaaagacgcaagcatcagatctactcaggcaatgttacattttcctgc
tcagaaccagaaattgtgcccatcacatttgtcaactccaggagcagttatttgctgctt
cctggcatcccccaaattcatggtctgtcagtgagtttccactttcggacatggaatgaa
gatggtctgcttctgtccacagaactgtctgaaggctcagggaccctgctgctcatcctg
gatggtgggagtctgaggctccttattaagaaagtagcaagacatggaactgaaatcatc
acaggaagcagcttgaatgatggcctctggcattctgtcagcatcaatgccaggagaaat
cgtgttactctcacactggataatgatgctgcttccccagctctggacacctctcagcta
cagatttattctggaaatagttactactttggagggtgccctgacaatcttaccgattcc
caatgcttaaaccccattaaggctttccaaggctgcatgaggctcatctttattgataac
cagcccaaggacctcatttcagttcagcaaggttccatggggaattttagtgatttacac
attgatctgtgtagcatcaaagacaggtgtttgccaaactactgtgagcatggaggacat
tgtgcccaaaactggactaccttctactgcaactgtagtgacactggttacacaggagct
acttgtcatgactccgtctatgagcaatcttgtgaggtgtatagacacaaaggacacaca
gctgggttcttctatgttgactctgatggcagtgggccactgggaccccttcaggtgtac
tgcaatattactgaggacaagatctggatgacagttcagcacaataacacagagctaact
tgggtacagatttccaatgctgagaaggcctatgccatgaccttcaactatggtggcagt
atggagcagctggaagctctgattgatggctcagagcactgtgaacaggaggtgacatac
tactgcagaagatcccacctgcttaaaacaccagatggagccccattcacctggtggatt
ggaagatccaataaaaggcacaactactgggaaggttctgttcctagagttcaacagtgc
agatgtgtccacaaggagaactgcctggacattcgatctttttgcaattgtgatgctgac
ataggtgaatgggcaaaagaaactggttttctttccttcaaagatcatttgccagtaact
caaataattactactgataccaacagatcaaaatcagaagctgcttggaaaattggcccc
ttacgttgctatggtgaccgacatttctggaatgctgtctcatttactactgaagcttct
tacctctactttcctacattccatgcggaattcagcgctgatatttccttcttttttaag
accactgctttatctggagtatttctagaaaaccttggcattaaagacttcctccgactt
gaaatgagctctccttctgagatcacattcaccattgatgttgggaatggccctgtggag
ctcctcatacagtctccttatcctctgaatgacaatcaatggcattatatccgggctgag
agaaacctcaaggagacctcccttcaggtggacaaccttccacagagcatgagagaggcc
tcagaggaagcctatttccgacttcatttgactagccagttgtttgtaggaggaacatca
tcaagacagaaaggctttcttggatgcatgcgctctttacacttgaatgggcagaacaca
gacctgatagagagggcaaagttaatgtctggagtcacacctggctgtctaggtcactgc
agtagctacggcagcaactgcctcaatgggggcaagtgtgtggagaaacaaagtggctat
tcctgtgactgcaccaactcaccaaatgaaggacctttctgccagaaagaaatttcagct
ctttttaattctggcacctctgtaacatacctgtttcaagaaccttacctggtgatcaag
aacacaagtctcttatcttcacctatctacgcagatactgctccatccaaggaaaccatc
atgctgaatttcttgacaacacaagcccccaccatcttgctctacctcaatttctcttct
cagaactttctggctatcttgctttccagaaatggaagtttacagatatgctttcgacta
agcaaaatagaaagtcatgtgtacaccatgaacacagagaatctggcaaatggaagagtg
caccaggtgaagattaacaaagacggaccagaactttccattcagatggaccagcaactc
ttcacctataacttctccccaaaagttgaattctggacactgaagtcacttgttctaggc
aaagtcacagagactcttgggttggacccagaagttgctaaagtaaacatcttgggtttt
gttggatgcctttcttcagtccagtacaatcacatagcaccattgaaagcagccctccgc
cattctggcattgcacctgtgactgttcaagggaccttgactgaatccggatgtgactcc
actctagactctgatgtgaatgcagtgaccactgtgcattcttcattagatcccattgga
aagagagatgagcgtgaaccactcacagacactgtccaaagtgactcagcagtcattgga
ggtatcatagcattggtgacatttgtcactttttgtgtaattggaatcatgatccacttc
ctgtatttgcataagcagtcacactgcaccaatcagacgaaggagaaggaatactcagag
aacttaagcaattcattcagaaatgccattgacttgcaaaacacagccagcgagtgcaaa
cgggaatactttatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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