KEGG   Rattus norvegicus (rat): 297865
Entry
297865            CDS       T01003                                 
Symbol
Dsel
Name
(RefSeq) dermatan-sulfate epimerase-like protein precursor
  KO
K01794  chondroitin-glucuronate 5-epimerase [EC:5.1.3.19]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00532  Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
rno01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
    297865 (Dsel)
Enzymes [BR:rno01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.19  chondroitin-glucuronate 5-epimerase
     297865 (Dsel)
SSDB
Motif
Pfam: Sulfotransfer_1 Sulfotransfer_3 DUF4962
Other DBs
NCBI-GeneID: 297865
NCBI-ProteinID: NP_001292210
RGD: 1307724
Ensembl: ENSRNOG00000032307
Vega: OTTRNOG00000002440
UniProt: A6K6R8 D3ZYE3
Position
13:complement(194738..200959)
AA seq 1208 aa
MALMFTGHLLFLTLMMCSFTTCEESVSNYSEWAVFTDDVQWFKTQKIQDFKLNQKLYPNL
YFDAGDIQTMKQQSRTSHLHIFRAIKSAVTIMLSNPSYYLPPPKHAEFAAKWNEIYGNNL
PPLALYCLLCPEDKVAFEFVMEYMDRMVSYKDWLVQNAPGDEVPLGHSLTGFATAFDFLY
NLLGKQRKQKYLEKIWIVTEEMYEYSKIRSWGKQLLHNHQATNMIALLIGALVTGVDKGS
KANIWKRVAVDEMEKTMFILNHIVDGSLDEGVAYGSYTSKSVTQYVFLAQRHFNISNFDN
NWLKMHFWFYYATLLPGYQRTVGIADSNYNWFYGPESQLIFLDKFILRNGAGNWLAQQIR
KHRPKDGPMVPSTAQRWSTLHTEYIWYDPTLPPQPPVDFGTAKMHTFPNWGVVTYGGGLP
NTQTNTFVSFKSGKLGGRAVYDIVHFQPYSWIDGWKSFNPGHEHPDQNSFTFAPNGQVFV
SEALYGPKLSHLNNVLVFAPSPSSQCNQPWEGQLGECAQWLKWTGEEVGDAAGEVIAAAQ
HGERMFVSGEAVSAYSSAMRLKSVYRALILLNSQTLLVVDHIERQETSPINSVSAFFHNL
DIDFKYIPYRFMNRYNGAMMDVWDAHYKMFWFDHHGNSPVASIQEAEQAAEFKKRWTQFV
NVTFHMESTITRIAYVFYGPYVNVSSCRFIDSSSSGLQISLYVNSTEHSVSVVTDYQNLK
SRFRYLGFGGFASVANQGQITRFGLGTQAILNPVRHERVINFPFGFKFNIAVGFILCISL
VILTFQWRFYLSFRKLMRCVLILVIALWLIELLDVWSTCTQPICAKWTRTEAKANEKVII
SEGHHVDLPNVVITSLPGSGAEILKQLFFNSSDFLYIRIPTTYMDIPETEFEIDSFVDAC
EWKVSDIHSGQFHLLRGWLQSLVQDTKLHLQNIHLHETSRNKLVQYFTTNKDKKRKLKRR
ESLPDQRSRIKGSFDIDAEYIRALRRHLVYYPSARPVLSLSSGSWTLKLHFFQEVLGTSM
RALYIVRDPRAWVYSMLYGSKPSLYSLKNVPDHLAKLFKIEEGKSKCNSNSGYAFEYESL
KKELEIPQLNAVSLLSHLWVANTAAALRINTDLLPTNYHLVKFEDIVHFPQKTTERIFAF
LGIPLSPASLNQILFATSTNLFYLPYEREISPSNTNIWKTNLPRNEIKLIENICWTLMDR
LGYPKFMD
NT seq 3627 nt   +upstreamnt  +downstreamnt
atggcgttaatgtttacaggacatttattatttttaacattgatgatgtgtagttttact
acttgtgaagaatctgtgagcaattattctgaatgggcagttttcactgatgatgtacaa
tggtttaagacacagaaaatacaagatttcaaactcaaccaaaaactttatccaaattta
tactttgatgccggagatatacaaacaatgaaacaacagtctcgtacaagccatttgcat
atttttagagctatcaaaagtgcagtgacaattatgctgtccaacccatcatactaccta
cctccacccaagcatgctgagtttgctgccaagtggaacgaaatatatggtaataacctt
cctcctttagcattgtattgtttattatgcccagaagacaaggttgcctttgaatttgtc
atggaatatatggacaggatggttagctacaaagactggctagttcagaatgcaccaggg
gatgaggttccacttggccattctttaacaggttttgctactgcctttgactttttatat
aatctattaggtaagcagcggaaacaaaaataccttgaaaaaatttggattgttactgag
gaaatgtatgaatattccaagattcgctcatggggcaaacaacttcttcataatcaccaa
gctacaaatatgatcgcattactcataggggccttggttactggagtagataaaggatct
aaagcaaacatatggaaacgggttgctgttgatgagatggaaaaaactatgtttatcttg
aaccatattgtagacggctctttggatgaaggtgttgcctatggcagctatacctccaaa
tcagttacacagtatgttttcttggcacagcgccattttaacatcagtaactttgataat
aactggctaaaaatgcacttttggttttattatgctacacttttgccaggctatcaaaga
actgtaggcatagcagattctaattataattggttttacggtccagaaagccagttaatt
tttttggataagttcattttacggaatggagctggaaattggttagctcagcaaattaga
aagcatcgacctaaggatggaccaatggttccttccactgctcagcggtggagtactctt
catactgaatacatctggtatgatccaacgctccccccacagcctcctgttgattttggc
actgcaaaaatgcacacatttcctaactggggtgttgtgacttatgggggtggcttacca
aacacacagaccaatacctttgtgtcttttaaatctgggaaactgggaggacgagctgta
tatgacatagttcactttcagccatattcctggattgatggatggaaaagctttaaccca
ggacatgaacatccagatcaaaattcatttacttttgcccctaatggacaagtatttgtt
tctgaggctctttatggaccaaagttgagccaccttaacaatgtattggtgttcgcccca
tcaccatcaagccaatgtaatcagccctgggaaggtcaactgggagaatgtgcacaatgg
ctcaagtggactggtgaagaggttggtgatgcagctggggaagttattgctgctgctcaa
catggagaaaggatgtttgtgagtggggaagcagtgtctgcttattcttctgcaatgaga
ctgaaaagtgtctatcgtgctttaattcttttaaattcgcaaactctgcttgttgtggat
catattgaaaggcaagagacttccccaataaattctgtcagtgccttctttcataatttg
gatattgattttaaatacatcccatacaggtttatgaatcggtataatggtgccatgatg
gatgtgtgggatgcacactataaaatgttttggtttgatcaccatggcaacagtcctgtg
gccagtatacaagaagcagaacaggctgcagaatttaagaaacggtggactcagttcgtt
aatgttacatttcatatggaatccacaatcacacgaattgcttatgtattttatggtcca
tatgtcaatgtttccagctgcagatttattgatagttccagttctggacttcagatttct
ttatatgtcaatagtactgaacatagtgtttctgttgtaactgactaccaaaacctgaaa
agcagattcagatacctgggatttggtggttttgccagtgtggctaatcaaggacaaata
actcgatttggtttgggtactcaagcaatattaaaccctgtaagacatgaaagagttatt
aatttccccttcgggtttaaatttaatatagcagttggattcattttgtgtattagtttg
gttattttaacttttcagtggcggttttacctttcctttagaaagctaatgcgctgtgta
ttaatacttgttattgccttgtggttaattgagcttctggatgtatggagcacttgcact
cagcccatctgtgcaaagtggacaaggacagaagctaaggcaaatgagaaggtcattatt
tccgaagggcatcatgtggatcttcctaatgttgttattacctcactccctggttcagga
gctgaaattctcaaacagctttttttcaatagtagtgattttctctacattagaattcct
acgacctacatggatatccctgaaactgaatttgaaattgactcatttgtagatgcttgt
gaatggaaagtatcagatatccacagtgggcaatttcatcttcttcgagggtggctgcag
tctttggtccaggatacaaaacttcatttacaaaacatccatctacatgaaaccagtagg
aataaactggtccaatattttacaactaataaggacaaaaaacggaaattgaaaagaagg
gagtctttgccagatcaaagaagtagaataaaaggatcatttgatattgatgctgaatat
attagggctttaagaagacacctagtttattacccaagtgcacgtcctgtgctcagctta
agtagtggtagctggacattgaagcttcatttttttcaagaagttttaggaacttcaatg
cgggcattgtacatagtaagagacccccgagcttgggtctattcaatgctatatggtagt
aaaccaagtctttattctttgaagaatgtgccagaccacttagcaaaattgtttaaaata
gaggaaggtaaaagcaagtgtaactcgaattctggctatgcttttgaatatgaatcactg
aagaaagaattagaaataccccaattaaatgctgtctcattattatctcatttgtgggta
gcaaacactgcagcagccttgagaataaatacggatttgctgcctaccaattaccatctg
gtcaagtttgaagatattgttcattttcctcagaagactactgaaaggatttttgctttt
cttggcattcctttgtctcccgctagtttaaaccaaatactatttgccacttccacaaac
cttttttatcttccatatgagagggaaatatcaccatctaatactaatatttggaaaaca
aatttgcctagaaatgaaataaagctaattgaaaacatttgctggacactgatggatcgt
ctaggatatccaaagtttatggactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (52)   

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