KEGG   Rattus norvegicus (rat): 297989
Entry
297989            CDS       T01003                                 
Symbol
Rig1
Name
(RefSeq) antiviral innate immune response receptor RIG-I
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: CARD_2 RIG-I_C DEAD ResIII AAA_25 zf-C2H2_aberr AAA_22
Other DBs
NCBI-GeneID: 297989
NCBI-ProteinID: NP_001382000
RGD: 1309460
Ensembl: ENSRNOG00000006384
Position
5:complement(60117398..60165995)
AA seq 926 aa
MTAEQRQNLQAFRDYIKKILDPTYILSYMSSWLRDDEVQCIQAEKNNKGPIEAASLFLRY
LLELQTEGWFRAFLDALYHAGYCGLYEAIETWDFQKLEKLEEHRLLLRRLEPEFKATVSP
TDILSEISECLINQECEEIRQICFTKGRMAGAEKMVQCLLRSDKENWPKVLQFALEKDNS
KFSELWLVDKGVRRVDCKAVEDDGTEMASIQIFIQEEPECQNLSQNPGPPSEASPNNSHS
PLKPRNYQLELALPAKKGKNTVICAPTGCGKTFVSLLICEHHLKNFPHGQKGKVVFFANQ
IPVYEQQATVFSRYFERFGYNVAGISGATADNVSVQHIIENNDIVILTPQILVNSLNNGA
IPSLSVFTLMIFDECHNTSKHHPYNQIMFRYLDHKLGGSPDPLPQVIGLTASVGVGDAKT
VEEAMLHICKLCAALDASVIATVRDNVEELEQVVYKPQKISRKVESRASNTFKCIISQLM
REAERLAKNVSEELGKFFQIQNREFGTQKYEQWIVAVHKACTVFQMPDKDEESRICKALF
LYTSHLRKYNDALIISEDAQMKDALNYLKAFFHDVREAAFDETEQDLTRRFEEKLEELEN
VSRDPSNENPKLRDLYLILQEEYHLKPETKTILFVKTRALVDALKKWIEENPALSFLKPG
ILTGRGRTNQATGMTLPAQKCVLEAFRANADNNILIATSVADEGIDIAQCNLVILYEYVG
NVIKMIQTRGRGRARDSKCFLLTSSADVIEKEKANMVKEKIMNESILRLQTWDEVKFQKT
VHRIQLDEKLLRDSQHKPQPVPDRENKKLLCGKCKTFACYTADIRVVEKSHYTVLGDAFK
ERFVCKPHPKPKIYDSFEKKAKIFCAKQNCSHDWGIFVRYKTFEIPVIKIESFVVEDIES
GVQNRHSKWKDFHFERKQFNPEEMST
NT seq 2781 nt   +upstreamnt  +downstreamnt
atgaccgcagagcagcggcagaatctgcaagcattcagagactatatcaagaagattctg
gaccccacctacatcctcagctatatgagttcctggctccgggatgatgaggtgcagtgc
attcaggccgagaagaacaacaagggcccaatagaggccgcctcactgttcctccggtac
ctgttggagctgcagacagagggctggttccgggcctttttggatgccctgtaccatgca
ggttactgtggactttatgaagccatcgaaacttgggactttcaaaaacttgaaaagtta
gaggaacacagattacttttaagacgtttagagccggaatttaaggccacagttagcccg
acagatatcctttctgaaatatctgaatgtttgattaatcaggaatgtgaagaaatcaga
cagatctgcttcactaaagggaggatggcgggtgcggagaagatggtccaatgtcttctc
agatccgataaggagaactggccaaaggttttgcagtttgctttggagaaagacaacagc
aagtttagtgaactgtggctcgtcgataaaggtgtcagaagggttgactgtaaggctgtt
gaggatgacggaacagagatggccagcatacagattttcattcaggaagaaccggagtgt
cagaatctcagtcagaatcccggccctccttcagaagcgtctcctaataattcacacagc
ccattgaaaccaagaaattaccaactggagcttgccctgcctgccaagaaagggaaaaat
acagtaatatgtgctcctactggttgtggaaaaacctttgtgtcgcttctcatatgcgaa
catcatcttaaaaactttccgcacggacagaaagggaaagtggtcttttttgctaaccag
atccctgtgtatgaacagcaggccactgtgttctcacgatatttcgaaagatttgggtac
aatgtcgccggcatttcgggggcaacggctgataatgtgtcagtgcagcacatcattgaa
aacaatgacatcgtcatcctgacaccccagattcttgtgaacagtctcaacaatggagcc
atcccctcgctgtctgtcttcactctgatgatattcgacgagtgtcataacaccagcaaa
caccacccgtacaaccagatcatgttcagatacctagatcacaaactcggagggtcaccc
gacccactgcctcaggtcattgggctgactgcttccgttggtgttggagatgctaaaacc
gtggaggaagccatgctgcacatctgcaaactctgtgccgccctcgatgcctcagtgatt
gccacagtcagagacaacgtggaagaactggagcaggttgtttataagcctcagaaaatt
tccaggaaagtggaatcacgggcttcgaacacgtttaaatgcatcatatctcagctgatg
agggaggcagagaggctggcgaagaacgtctctgaggaacttggaaagttctttcaaatt
caaaatcgagaatttggcacccagaaatatgagcagtggattgtcgccgttcacaaagca
tgcacggtgtttcagatgcctgacaaagatgaggagagcaggatctgcaaggcgctcttt
ctgtacacctcccacttgcggaaatacaacgacgccctcatcatcagcgaggatgcacag
atgaaagacgctctaaattacctcaaagccttcttccatgatgtccgagaagcagcattt
gatgagactgagcaagatcttacgcggaggtttgaagaaaaactggaggaactagaaaac
gtttccagggatcccagcaacgagaatcctaaactaagagacctctacttgatcttacaa
gaagaataccacttaaagccggagaccaagaccattctcttcgtgaagaccagagcactt
gtggatgctttgaagaaatggattgaagaaaatcctgcactgagttttctaaaacctggc
atactgactggacgtggcagaacaaaccaggcaacagggatgacgctccctgcacagaag
tgtgtgttggaggcattcagagccaatgcggataacaatattctgattgctacctcggtc
gctgatgaaggcattgacattgctcagtgcaatctcgtcatcctgtatgagtacgtgggc
aacgtcatcaagatgatccaaaccagaggcagaggaagagcacgagatagcaagtgcttc
ctcctgaccagcagtgctgatgtgattgaaaaagaaaaggcgaacatggtcaaggaaaaa
ataatgaatgagtccatcttaagactgcagacatgggatgaagtgaaatttcaaaagacg
gttcaccgcatacagctggatgaaaaactcctcagggacagtcaacacaaaccacagccc
gtccccgacagagaaaacaagaaactgctgtgtggaaagtgcaagacttttgcgtgctac
acagctgacattcgagtggtcgagaaatcccactacactgtgcttggagatgcttttaag
gagcgctttgtgtgtaagccacaccctaaaccaaagatctatgatagttttgagaagaaa
gcaaaaatattctgtgccaaacagaactgcagccatgactgggggatttttgtgagatac
aagacgtttgagattccagtcataaaaatcgaaagcttcgttgttgaagatattgagagt
ggagttcagaaccggcactcaaagtggaaggactttcattttgaaagaaaacagttcaat
cccgaagaaatgtccacatga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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