KEGG   Rattus norvegicus (rat): 298185
Entry
298185            CDS       T01003                                 
Symbol
Frem1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 precursor
  KO
K23380  FRAS1-related extracelluar matrix protein 1/2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    298185 (Frem1)
SSDB
Motif
Pfam: Cadherin_3 Frem_N Cadherin_4 Lectin_C Big_9 Calx-beta
Other DBs
NCBI-GeneID: 298185
NCBI-ProteinID: NP_001398464
RGD: 1306981
Ensembl: ENSRNOG00000022309
Position
5:complement(102367201..102515464)
AA seq 2167 aa
MHSPGCTGPKALLFLLLQLLMLHLDPANATFISINRGLRVMKGSSAFLSGDHLRFAIPKE
KDACRVEVVMNEPITQRVGKLIPQVFDCHFLPNEVQYVHNGCPILDEDSVKLRLYRFTET
ETFMETFLLRVSLVEPDCNIIRLSSNVLEVTEFYGLSQAIDKNLLQFDYDRTASLDCTIR
VDPVKTQLPAHGKLVVVNRKSEGPRGDQPHSFFSESQLGAERKCPDGSCTLEPKQVTSLK
VSCEDFLLTGFHYQHMQPPSPNIDYIPIQLDLTDRRSKTIYKSESAWLPVFIRVGIPNQA
PRAAFMAMFVLEVDQFILTPLTTSVLDCEEDETPKPLLVFNITEAPLQGYVTHLLDHTRP
ISSFTWKDLSDMQVAYQPPNNSHPERRHYKMELEVYDLFFERSAPITVHISIRTADTNAP
RVSWNTGLNLLEGQSRAITWEQFQIVDNDDIGAVQLVTIGGLQHGRLTVREGKGFLFTVA
DLQAGVVRYHHDDSDTTKDFVAFRIFDGQHSSHHKFPINILPKDDSPPFLITNVVIELEE
GKTILIQGSMLRASDMDSSDDYIFFNITKFPQAGEIMKKPGPRLIGYPVSGFLQRDLFSG
IIYYRHFGGEIFEDSFEFVLWDSHEPPNLSVPQVVMVHITPVDDQLPKEAPGISRHLIVK
ETEVAYITKKHLHFLDTESHGGELVYTITRPPCFSSSHRHLDAGKLFMVDSIPKPTKNPT
APGLNSFTQHAVNHMKVAYMPPMQDIGPTPRHVQFTVSVSNQHGGTLHGICFNITVLPVD
NQVPEVFTNTLRVAEGGQCTISTEHILVSDVDTPLDSICLSLQEMPLHGGVELDGFPLNP
RGTFSWRDLHTLKVRYQHDGSEVLQDEIFLEVTDGTNSAGFVLYIEVFPVNDEPPVLKAD
LIPMMHCSEGGEVTITPEYIFATDADSNDSELLFLITREPRHGVVRKAGLRVDRFSQGDV
ISGAVAYKHTGGEIGLESCFDTVVLVVSDGEADPLVNGCCYNGPDSSVPLHKSFPTYQLN
ITVHPVDNQPPSIIIGRTLTVDEGFSAALTTHHLTATDWDTAPDDLEFILVSHPQFGYLE
NTLPSAGFEKRNTGISIASFQWRDMKASHINYVQSRHLREEPTADEFLVYATDGKQRSLE
TTFHVIINPTNDEAPDFVVQNITVYEGHMVELDSAIISATDRDVPKDPLLFNITHKPKHG
LLLISATSKDAHNEIHNFSMELLQNGMKLAYAHDDSESSADNFVIQLSDGKHKILKTVSV
SITPVNDETPTLSKKAEVSVTVGDTRVLSSAVLSAIDKDSPREKIHYLFERLPQNGQLQL
KIGRDWVPLSAGMQCTQEDVDLNLLRYAHAGKMHSQDGDRFTFYLWDGDNRSPAFDCHII
IEDTGRGDIVIHAKPLVVANGDRGLLTPATLLAEDGADKAEELLYLITSPPQYGQVEYVY
SPGVPITSFSQMDIAGQAVCYIHKSRTAVLSDSFRFTISNGLQTQQGVFEITLQGVDSAL
PVLTRNRRLRLVEGAMGLLSTDHLQLTDPDTPPENLTFFLVQLPRHGYLYLRGKVLQHNF
TQQDVDSRVVAYQHAGGGAQEDCFTFLATDRKNQGFVVDGKVQKEPVLFIIQVDQLDKKA
PRITRLHSPSQVGLLKNGCYGIYITSHVLKASDPDTEDDQIIFKILRGPLHGRLENTTTG
EFIHEQFSQKDLSRKTILYIINPSLQVNSDILEFQAMDPTGNTAPPQRLELKWSYIEWSQ
TEYEVCENVGLLTLEVTRRGYSMDSAYVDIEVNQVSAVVGKDFTVTPSKLLQFDPGMSTK
MWNIAITYDGLEEDDEVFEVILNSPVNAVLGTQTKAAVKILDSKGGRCHPSNSFNQSKHS
TWGKGRWHPLPSGSSSLTTSGSPHLERRPPPSITKGDALRGFDLTDLSQRKMTTQGNGKS
VLPSSVCRNGTDTIYNYHGIVSLKLEGDRFSAHKRKAKISVIRQPQRTVKVAELPLADKV
EPTTDSNFLSQGLRPLFPKNCSVELKGLFHLEEHTHRLYQCDGIAWNVWSSQTKGLEDRS
CPVGWLLHSDYCHVLVTRQKGTWATATRACREQHQGTLVTVFSRRHMQWLWAISGRKPFW
IGLKNQVRTGHWEWIGGEPVAFTNWRRGPPLHPKPGKNCVLVQRRGQWQTKNCSKGKAHN
FVCSRKL
NT seq 6504 nt   +upstreamnt  +downstreamnt
atgcactctccaggctgcactgggcccaaggctctgttgttcttgctgctccagctgctt
atgctacacctggacccagccaatgccaccttcatcagcattaaccggggcctgagggtg
atgaagggtagttctgccttcctgtctggagatcacctgaggtttgccatccctaaagag
aaggacgcttgcagagtggaggtggtgatgaatgaacccataacccagagggttgggaaa
ctcattccacaggtctttgattgccattttcttcccaacgaagtacaatatgttcacaat
ggatgcccaattctggacgaagactctgtgaagcttagactttacaggtttactgaaaca
gagactttcatggaaaccttcctcttgcgggtctctcttgtggaaccagactgtaacatc
atccgcctgagcagcaacgtgttggaagtgactgaattctatggcttatcccaagccatt
gataagaacctgctccagtttgattatgataggacagccagtctggactgcaccatcaga
gtagaccccgtgaagactcagctgccagcccatggcaagctggttgtggtgaatcggaag
tcagagggaccgcgtggagaccagccacacagctttttctctgagtcacagctaggggca
gaacggaagtgtccggatggaagctgtactctggaaccgaagcaagtgacaagtctgaaa
gtgagctgtgaggacttcctgctgacagggtttcactaccaacacatgcagcccccttca
cccaacattgactacatccccattcagttggatctcacagacagaaggagtaaaaccatt
tacaagtcagagagcgcgtggttgcctgtcttcatcagagttggcattcctaaccaggcc
ccaagggctgctttcatggccatgtttgttctggaggtggaccagttcatattgacccct
ctgacaacctccgtgctggactgtgaggaggatgagactccgaaacccttgctggtgttt
aacatcactgaagccccactccagggctatgtgacccacctgctggatcataccagaccc
atctcttcatttacctggaaggatctcagtgacatgcaagttgcctaccagccaccgaac
aacagccaccctgagaggagacattacaagatggagctggaggtgtacgacctcttcttt
gagaggagcgcccccatcacagttcacatctccatcagaacagcagacacgaatgcacct
cgggtgtcctggaatacaggtttgaatctcctagaggggcagtctcgggccatcacttgg
gaacagtttcagatcgtggacaatgatgacattggtgctgtgcagttggtcaccattggt
ggtctgcagcatggacggcttacagtaagagaggggaaaggatttctcttcaccgtggct
gatcttcaggctggagttgttcgctatcatcatgatgacagtgataccaccaaagacttt
gtggctttcaggatattcgatggccaacacagcagccatcacaagtttcctatcaacatc
ttgcctaaagatgacagtcccccattcctcataaccaatgtcgtgattgaactagaagag
gggaagaccatcttgatccaagggtccatgctgagagcttcagacatggactccagtgat
gactacatcttcttcaatatcacaaagttcccacaggctggggagatcatgaagaagcca
gggccaagattgataggatatcctgtctctggcttccttcagagagacctgttcagtgga
atcatttactatcgtcactttggtggagaaatctttgaagattcttttgaatttgtcctg
tgggacagccatgaacctccaaatctctcagtgccacaggtggtgatggtccatataact
ccagtagacgaccagcttcccaaggaagctcccggcatatcccggcatttgattgtcaag
gaaacggaagtggcctacatcactaaaaagcacctacatttcctagacacggaatcgcat
ggtggggagcttgtctacacaataacacgccctccatgcttctcctccagccacaggcac
ttggatgctgggaagctgttcatggtggacagcataccaaagccaaccaagaatcccaca
gccccagggctgaactcatttactcagcatgctgtgaaccacatgaaagtggcctacatg
ccacccatgcaggatataggtcccacacctcgacatgtgcagttcacagtgtccgtcagt
aaccagcatggaggtactttgcatggaatctgcttcaacatcacagtgctcccagtggac
aatcaggttcctgaggtattcaccaacaccctgagagtggctgagggtggccaatgcacc
atcagcacagagcacattttggtttctgatgtggacaccccactggacagcatctgcctc
tctcttcaggagatgcccctgcatggcggggtagagctggatggatttcctctaaaccca
agaggcacattttcttggcgagacctccataccttaaaagttaggtatcaacatgatgga
tctgaggttcttcaggatgagatattcttggaggtcacagacggcacaaattctgcagga
tttgttctctacattgaggtattccctgtgaatgatgagccacctgttctaaaggctgac
ctcattcccatgatgcactgctcagagggtggagaggtgaccatcacccctgaatacatt
ttcgctactgatgcagacagcaatgactcagaactgctatttctgattacccgagaacct
cggcatggagtagtgagaaaagctggactccgtgtggacaggttctctcagggagatgtc
atctcaggagctgtggcatacaaacatacaggtggcgagattggcctcgaatcttgtttt
gacactgttgtattggtggtttcggatggtgaagctgaccctttggtgaatggctgttgc
tacaatggacccgattcatctgttcctcttcataagtccttccccacataccagctcaac
atcacggtgcatccagtcgacaatcagccaccttcaattataataggtaggacgctcacg
gtggacgaaggcttctcggcagcccttacgactcatcacttgactgccactgactgggac
actgctccggatgacttggaattcattttggtttctcatccccagtttggctacctagaa
aacacactgccctctgcaggctttgagaaaaggaatacgggcataagcatagcttcattc
cagtggagagacatgaaagcttcgcatattaactatgtgcagtccaggcacctgagggag
gagccaactgctgatgagttcctggtgtacgccacagatgggaagcaacgctccttggag
accacatttcacgttatcatcaaccccacaaatgatgaagctcctgattttgtggtacag
aatatcactgtgtacgagggccacatggtagagctggattctgccatcatcagtgctact
gacagggatgttcccaaggaccccttgctcttcaacatcacgcacaagcccaagcatggc
ctcctcctcatctcggccaccagcaaggatgctcataatgaaattcacaacttctccatg
gaactgctccagaatggaatgaagctggcgtatgcccacgatgactcggagagctctgct
gacaacttcgtgatccagttatcagacgggaaacataaaatccttaaaaccgtttcagta
agcatcaccccagtgaacgacgagacaccaacactaagcaagaaggctgaagtctcagtg
actgtgggcgacactcgtgttctgtctagtgctgttctttcagccatagataaagactca
cccagggagaagattcactacttatttgaaagacttccccaaaatgggcaacttcaactt
aagatagggagggactgggtccctctctccgctggcatgcagtgcacccaggaggatgtg
gacttgaacttgctaagatacgcgcatgctggtaaaatgcattcccaggatggagaccgc
tttaccttctacctctgggacggggacaacaggtcacctgcatttgactgtcacatcatc
attgaagacacaggaagaggtgatattgtcattcatgcgaaaccactcgtggtagccaac
ggtgacagaggtctcttgacgcctgccactcttctggctgaggatggagcagacaaggct
gaggaattactctaccttatcacttccccaccacagtatggccaagtggagtatgtctac
tctcctggagtccccattaccagctttagccaaatggacatagcaggacaggcagtctgc
tacatacacaagagcaggaccgctgtcctcagtgacagtttcagatttaccatcagcaat
ggactgcagacccagcagggggtgtttgagatcacactgcagggtgtggacagtgccttg
cctgtgctgaccaggaaccgaaggctgaggcttgtggaaggggccatgggcctgctgtcc
acggatcaccttcagctgactgaccctgacacacctccagagaacctaaccttctttctg
gtccagctcccgcgccacgggtacctctacctgagagggaaagtacttcagcacaacttc
acccagcaagatgtagacagcagggttgtggcctaccagcatgcaggaggcggtgcccag
gaggactgctttactttcctggccacagacaggaagaaccaaggcttcgttgtggatggg
aaagttcagaaagagcccgttctcttcattatccaggtggaccagctggataagaaggcg
cctcggatcacacgcttgcactccccttctcaagtggggctcttgaaaaatggctgctat
gggatttacatcacttcccatgtgctaaaggcgtctgaccctgacacagaggatgaccag
atcatctttaagattttacgaggcccgttgcatggacgtctggagaacacgacaacaggt
gaattcatccacgagcaatttagccagaaggacttgagccgcaagaccatcctttatatc
ataaacccttctttgcaagtgaattcagatatcctggaatttcaggccatggaccccaca
gggaacactgcccctccccagagattggaactgaaatggtcatatattgaatggtcccag
actgaatatgaggtctgtgagaatgtgggcttactgaccttggaagtcaccagaagggga
tattccatggactcagcctatgtggacatagaggttaaccaagtgtcagctgtagttgga
aaagattttactgtcactccatccaaactgcttcaatttgacccaggaatgtcaactaag
atgtggaatatagcaattacctatgacggattagaggaagacgatgaggtctttgaagta
attctgaactcccctgtgaatgcggttcttggcacacagacaaaagcagcagtgaaaatt
ttggactcaaaaggaggacggtgccatccttcaaattccttcaaccaaagcaagcacagc
acgtgggggaagggacgttggcatccactgccctcagggtcatcctcactcaccacttcc
ggttctcctcatctggaaagaaggccccctccatccatcaccaaaggagatgctcttcgg
ggttttgatctcacagacctctctcaaaggaagatgacgacacaggggaatggcaaatca
gtcctcccatcctctgtttgtagaaatggaacagacaccatctacaattatcatggtata
gtttccttgaaactggagggggacagattctcagctcacaaacggaaggccaaaatatcc
gtcattcgtcagccacagaggacagtcaaggtggcagagctgcctctagccgataaggta
gaacccacaaccgactcgaactttctcagtcagggtctacggcccttgtttccaaagaac
tgttctgtggaattaaagggactctttcatttggaagaacacacccacagattgtatcaa
tgtgatgggatcgcctggaacgtctggagctcccaaaccaaggggctggaggacagatcc
tgcccagttggatggcttcttcattccgactactgtcacgtcttggtcacaaggcagaaa
ggcacctgggccacagctacccgagcttgcagagaacagcaccagggcacccttgtgacc
gtattctccaggaggcacatgcagtggctgtgggctatcagcggaagaaagcccttctgg
ataggcttgaagaaccaagtgcgaactggccactgggagtggattggaggtgaacctgtt
gctttcaccaactggaggagagggccccctctgcacccgaagcctggaaagaactgtgtt
ttggttcaaagaagaggacaatggcaaacaaagaactgtagcaaaggcaaggctcacaat
tttgtgtgctcaaggaaactctga

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (6)   
   Pfam (6)   
All databases (55)   

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