KEGG   Rattus norvegicus (rat): 298426
Entry
298426            CDS       T01003                                 
Symbol
Nsun4
Name
(RefSeq) 5-methylcytosine rRNA methyltransferase NSUN4
  KO
K21970  5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    298426 (Nsun4)
   03029 Mitochondrial biogenesis [BR:rno03029]
    298426 (Nsun4)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   298426 (Nsun4)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    298426 (Nsun4)
SSDB
Motif
Pfam: Methyltr_RsmB-F FtsJ Herpes_UL20
Other DBs
NCBI-GeneID: 298426
NCBI-ProteinID: NP_001100148
RGD: 1559652
Ensembl: ENSRNOG00000012020
UniProt: A6JZ58 D4A099
Position
5:complement(134749024..134773630)
AA seq 381 aa
MAAPVLRGVRKLLKLADFTPVPRRHRYKKKWATTEPQFTPSRLALQNFDMTYSVQFGDLW
PSIRVSLLSEQKYGALVNNFAAWDSVSAKLEQLSAKDFVSEAISYQKLEPESGLSPTLSL
DCSPNLRCFTFSKGDVSRFPPASVGSLGLMDYYLMDAASLLPVLALGLQHGDIVLDLCAA
PGGKTLALLQTGCCRNLAANDLSTSRTGRLQKVLHSYVPQDIRKGNHIRVTSWDGRKWGE
LEGDTYDKVLVDVPCTTDRHSLHEDENNIFQRSRKKERQMLPMLQVQLLGAGLLATKPGG
HVVYSTCSLSHLQNEYVVQGAIELLANQYNIKVQVEDLSHFRKLFMDTFCFLPSCQVGEL
VIPNLMANFGPMYFCKLHRVP
NT seq 1146 nt   +upstreamnt  +downstreamnt
atggctgcgcccgtattaagaggtgttcgaaagctgctgaagctcgcggacttcacgcca
gtcccgcggagacatcgatataagaagaaatgggctaccacagaaccacaattcactccc
agccggcttgctctgcagaattttgacatgacttacagtgtacagtttggggatctttgg
ccatcaatccgtgttagtcttctctcagagcagaagtatggtgcactagtcaataatttt
gctgcctgggatagtgtgagtgctaagctggagcagctgagtgccaaggactttgtcagt
gaagccatctcttaccagaaactggagcctgagagtggcctctctccaactctatccctg
gactgcagccccaaccttcgatgcttcactttttccaaaggggatgtcagccgcttccct
cctgccagtgttggcagcctgggtctcatggactactacctgatggatgccgcctccttg
ctacctgtgctggctcttggtctgcagcatggagacattgtgcttgacctgtgtgccgct
cctgggggaaaaacactggccctacttcagacgggctgttgccgtaacctagctgccaac
gatctctctacctcccgaacaggcagactacagaaggtccttcacagttatgtgcctcaa
gatattaggaaagggaaccacattcgagttacctcatgggatggcaggaagtggggagag
ctggagggggacacctatgataaggtgttagtagatgtgccgtgtaccacggaccgccac
tcccttcatgaggacgagaacaacatctttcagcggtcaaggaagaaggagcgacagatg
ttgcctatgctgcaggtgcagcttcttggggctggactccttgccaccaagcccggaggt
cacgttgtctattccacttgttcactgtcacacttacagaatgagtatgtggtgcagggt
gccatcgagcttctggccaatcaatacaacatcaaggttcaagtggaagacctgtctcac
ttccgaaagcttttcatggacacattctgtttcctcccatcctgccaggttggggagctg
gtaataccaaacctcatggccaattttggacctatgtacttctgcaaattgcacagggtg
ccatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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