KEGG   Rattus norvegicus (rat): 298429
Entry
298429            CDS       T01003                                 
Symbol
Rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    298429 (Rad54l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    298429 (Rad54l)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     298429 (Rad54l)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 Rad54_N SWI2_SNF2
Other DBs
NCBI-GeneID: 298429
NCBI-ProteinID: NP_001128432
RGD: 1310600
Ensembl: ENSRNOG00000013148
UniProt: B5DFE8
Position
5:complement(134812158..134841821)
AA seq 748 aa
MRRSLAPSQLARRKPEDISSDDEDWQPETVTPKKRKSTAETQAQQCFLSPFRKPLTQLLN
RPPCLDSSQHEAFIRSILSKPFKVPIPNYQGPLGSRALGLKRAGVRRALHDPLEEGALVL
YEPPPLSVHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCI
MADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQP
LAIDGGSKDEIDRKLEGFMNQRGARVPSPILIISYETFRLHVEVLKKGNVGLVICDEGHR
LKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELP
ILKSRDAAASEADRQLGEERLRELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQ
TELYKRFLRQAKPEEELHEGKMSVSSLSSITSLKKLCNHPALIYDKCVAEEDGFEGTLGI
FPPGYNSKAVEPQLSGKMLVLDYILAMTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYLY
VRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND
EQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE
LKELFTLDEASLSDTHDRLHCRRCVNNRQVWPPPDGSDCTSDLAQWNHNTDKRGLQDEVL
QAAWDASSTAITFVFHQRSHEEQRGLHC
NT seq 2247 nt   +upstreamnt  +downstreamnt
atgaggaggagcttagctcccagccaattggccaggaggaaaccagaagacatatcgtct
gatgatgaagactggcagcctgagacagtaacccctaaaaaacgcaagtccactgccgag
acccaggcccagcagtgtttcctgtctccttttcggaagcccttgactcagttactcaac
cgaccgccttgtctggatagcagtcagcatgaagcgtttatccgaagtattttgtcaaag
cctttcaaggtccccattccaaattatcaaggtcccctgggctctcgagcattgggcctg
aagagggctggcgttcgtcgtgccctgcatgaccctctggaagaaggtgccttggtcctg
tatgagcctcccccactgagcgtccatgaccaactgaagcttgacaaagaaaaactccct
gttcacgtggttgtagatcctattctcagtaaggtgttgcgacctcatcagagagaggga
gtgaagttcctttgggagtgtgtcaccagtcgacgaattcctggaagccatggctgcatc
atggctgatgagatgggcctaggaaagacactgcagtgcatcacattgatgtggacactt
ttgcgccagagcccagagtgcaagccagaaattgagaaagcagtggtggtctcaccttcc
agcctggtgaagaactggtacaatgaggttgagaaatggcttggagggaggatccaacct
ctggccatcgacggaggctcaaaggatgagatagaccgaaaactggaaggattcatgaac
cagcgtggagctagggtgccttcccccatcctcatcatctcctatgagactttccgcctg
catgttgaagttcttaaaaaaggaaacgttggactggtcatatgtgacgagggccacagg
ctaaagaactctgagaaccagacttaccaggctctggacagtctgaataccagccggcgg
gtgctcatctccgggacccccatccagaacgatttgcttgaatatttcagcttggtgcac
ttcgttaattcaggcattttgggaactgcccatgaattcaagaagcattttgaattacca
attttgaagagtcgagatgcagctgccagtgaggcagataggcagcttggagaggaacgt
ttgcgggagctcatcagtattgtgaacaggtgcctgatacggagaacatctgatatcctc
tctaagtatctgccagtgaagattgagcaggtggtttgttgtaggctgacaccccttcaa
actgagctatacaagagatttctaagacaggctaagcctgaagaagaattgcatgagggc
aagatgagtgtatcttccctgtcttctatcacctctctaaagaagctgtgtaatcatcca
gctctaatctatgacaagtgtgtggcagaggaggatggctttgagggcactttgggtatc
ttcccccctggttataactctaaagctgtagaaccacagttgtcgggtaagatgctggtc
cttgactacattctggccatgactcgaagccgtagcagtgacaaagtcgtgctggtgtca
aattatactcagacattggatctctttgaaaagctgtgccgggctcgaaggtacttgtat
gttcgcctggatggcacgatgtccattaagaagcgagccaaagttgtggagcgcttcaat
agcccatcgagccctgatttcgttttcatgctgagcagcaaagctggaggctgtgggctt
aacctcattggtgctaaccggctggtcatgtttgatcctgactggaatccagccaatgat
gaacaagctatggcccgagtctggcgagacggtcaaaagaagatctgctatatctaccga
ctgctctctgcaggaacaattgaggaaaagatctttcagcggcaaagccacaagaaggct
ctgagcagctgtgtggtagatgaggagcaggatgtggaacgtcacttctctcttggtgag
ctcaaagagctgtttaccctggatgaagccagcctcagtgacactcacgacagactgcat
tgccgccgttgtgtaaataaccgccaggtctggccaccccctgatggttctgactgcact
tcagacctggctcagtggaaccataacacagataaacgagggctccaggatgaggtactc
caggctgcctgggatgcttcatctacagccatcaccttcgtcttccaccagcgttcccat
gaggagcagcggggtcttcactgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (10)   
   RefSeq(nuc) (4)   
   GenBank (3)   
   EMBL (3)   
Protein domain (7)   
   Pfam (7)   
All databases (32)   

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