KEGG   Rattus norvegicus (rat): 298681
Entry
298681            CDS       T01003                                 
Symbol
Ssu72
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    298681 (Ssu72)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    298681 (Ssu72)
   03019 Messenger RNA biogenesis [BR:rno03019]
    298681 (Ssu72)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     298681 (Ssu72)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     298681 (Ssu72)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     298681 (Ssu72)
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 298681
NCBI-ProteinID: NP_001020828
RGD: 1307854
Ensembl: ENSRNOG00000017829
UniProt: Q4KLK9 A6IUR6
Position
5:171595919..171625675
AA seq 194 aa
MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTT
YDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVV
EDLNSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQCIQHTEDMENEIDELLQEFE
EKSGRAFLHTVCFY
NT seq 585 nt   +upstreamnt  +downstreamnt
atgccgtcatcgccgctgcgggtggcggtggtgtgctcgagtaaccagaatcggagcatg
gaagcacacaacatcctcagcaaacgtggtttcagtgtccgctcctttggaacaggaact
catgtgaagctcccaggaccagcacctgacaagcccaatgtttatgacttcaaaaccaca
tatgaccagatgtacaatgatctcctcaggaaagacaaagaactctatacacaaaatgga
attctacatatgttggacagaaataaaaggatcaagccccgtccagaaagattccagaac
tgcaaagacctgtttgacctgatcctcacttgtgaagagagagtctatgaccaggttgta
gaagatctgaactccagggaacaggagacctgccagccagtgcatgtggtcaatgtggac
atccaggacaaccatgaagaggccaccctgggagcattccttatctgcgagctctgccag
tgtatccagcacaccgaggatatggagaatgaaatcgatgagctgctgcaggagtttgag
gagaagagtggccgggcctttctgcatactgtctgcttctactga

DBGET integrated database retrieval system