KEGG   Rattus norvegicus (rat): 298884
Entry
298884            CDS       T01003                                 
Symbol
Gen1
Name
(RefSeq) flap endonuclease GEN homolog 1
  KO
K15338  holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    298884 (Gen1)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     298884 (Gen1)
SSDB
Motif
Pfam: XPG_I Chromo_2 XPG_N XPG_I_2
Other DBs
NCBI-GeneID: 298884
NCBI-ProteinID: NP_001100187
RGD: 1559792
Ensembl: ENSRNOG00000004667
UniProt: A6HAP4 D3ZVS5
Position
6:complement(39666675..39697480)
AA seq 908 aa
MGVNDLWQILEPVKQHIHLQDLCGKTIAVDLSLWVCEAQTVKKMIGTVMKPHLRNLFFRI
SYLTQMNVKLVFVMEGEPPKLKADVMNKRTQTRYGPSGKSRSQKTGRSHFKSVLRECLEM
LECLGMPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVD
CYTVSSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQALKLLQILKGQSLLQRFNQ
WTEEPGYSVPQSAAKKVVHCSVCSHPGSPKDHERNGCTLCKSDRYCEPHDYEYLCPCEWH
QTDHNRQLNEIENNIKKKACSCEGFPFHEVIQEFLSNKNKLLKPIRYQRPDLLLFQRFTV
QKMEWPSHYACEKLLVLLTRYDMIERKLGRKTSNQLQPIRIVKPRIRNGVCCLEIEWEKP
EHYSVEDTQPGGLDLLTIEEASLFEAAYPEVVAIYQKQQSETKGKKQKNIKIKPKGSHLP
ESDDVISSQSLITLEPISKAFPKQNPKFDLEISPDPILAQESTSPSLSSFVSPENALGLN
LQEQLMPSPRTLAVKQTKDVSNFLVSECSQPSSSSHNISVITDLHLSTIDWAGTSFSNSP
AVQRNTFSQDLQSEPESSAILPAFEQLSYESEQCTLSNKVSNRGLQKSGPEEHLLSSITG
LHLHDLPLKERIHIKSSCPQYNVGADADLESLPLTMNHSCIAYSSSGGSSHFSKDLTGVY
LQKELRNSKVLDSHFLQENFRVNTSLPYSFNDEAVKTSSLQVGLPTAAVPHNPKVDVKTK
NLVKKSSVCLKRDSSDEENAAVSWKAKYTAPKLKHSSHNHSLVHDRDSTHNKHRNPKDES
NETKLCTESFKIAEDEENKFSDPARNPQSFLQCHNKDEDSADCWESPLPLRQRLKLRFQN
TQSRLYNT
NT seq 2727 nt   +upstreamnt  +downstreamnt
atgggagtgaatgacctgtggcaaattttggagcctgtaaagcaacatatccacttgcag
gatctttgtgggaagaccattgccgttgatttgagtctctgggtatgcgaggcacagaca
gtgaagaaaatgattggaactgtcatgaagccccacctcaggaacctattttttcgtatt
tcatatttaactcaaatgaatgtaaaactggtgtttgtgatggaaggggagccaccaaag
ctgaaagctgatgtcatgaacaagaggactcagactcgatacgggccttctggaaaatcg
aggtctcagaaaacagggagatcgcattttaagtcagtcttacgagagtgccttgaaatg
ctagagtgcctaggaatgccctgggtccaggctgcgggggaagctgaggccatgtgtgct
taccttaatgccagcggccatgtggacggctgcctcaccaacgacggcgatgctttcctt
tatggagcccagactgtgtacaggaatttcaccatgaacacaaaggatccacatgttgac
tgttacacggtatcatctatcaagagtaagctaggcttggatcgagatgctctggtggga
ctggcggtacttcttggttgtgattaccttccgaagggagtgcctggagttggaaaagaa
caagcgttaaaacttttgcagattttgaaaggtcaaagtttgcttcagaggtttaaccag
tggactgaagaacctggctactctgttccacaatcagcagcaaaaaaagtggttcactgc
tcggtgtgttcccatccaggttctcctaaggatcatgaacgcaatgggtgcacactatgt
aaaagtgatagatactgtgaaccacatgattatgaatacctctgtccttgtgaatggcac
cagacagaccataataggcaactaaatgaaatagaaaacaatattaaaaagaaagcttgc
agttgcgaaggatttccattccatgaggtcatccaagaattcctttcgaataagaataaa
ctgttaaaaccgatcaggtaccaaagacctgatttattattgtttcagagatttactgtt
caaaaaatggagtggcccagtcactatgcgtgtgaaaaattgttggtgcttttgacccgc
tatgacatgatagaaagaaaacttggtagaaagacttccaatcaactacagccaattaga
attgttaaacctcgaatcagaaatggagtctgttgtcttgaaatagaatgggaaaagcct
gaacattattcggtagaagatacacaacctggaggactggatctccttacaatcgaagaa
gcatcactgtttgaagcagcctatcctgaagttgtagctatctaccagaaacaacagtca
gaaactaaagggaagaaacagaaaaatataaaaattaagcccaaaggaagccatctacca
gaatcagatgatgtgatcagttcccagtcacttattactttagaacctatatcaaaagcc
ttccccaagcagaatcccaaatttgatttggaaatttctccagatcctattttagcacag
gagtctacttctccctcattgagtagttttgtttcccctgaaaatgctcttggtttgaat
ttgcaagaacagttaatgccttctccaagaactttggctgtaaagcaaactaaagatgtc
agtaattttctagtttcagagtgtagtcagcccagttcttcatcccataatatttctgtg
attactgatctacacttgagtaccattgactgggcaggtacttcttttagtaattctcca
gcagttcaaagaaacactttctctcaagatttacaatcagaacctgaatcatcagccatc
cttcctgcctttgaacagttgtcatatgaatcagaacaatgtaccttaagcaacaaagtg
tccaatagaggtcttcagaagagtggtcctgaagagcatctcctttccagcatcactggt
ttacatcttcacgatttgcctctaaaggaaagaatacatataaaatcttcatgccctcag
tataatgtaggagcagatgctgacctggaaagtttacccctaacaatgaatcactcttgc
attgcttacagtagctctggtggttcatcccatttttcgaaggatcttacaggggtatat
cttcagaaagagctcagaaactctaaagttctagacagccacttccttcaagaaaacttc
agggtgaatacttccttaccttattctttcaatgacgaagcagtaaagacttccagtctt
caagttgggctgccaactgctgctgtacctcataatccaaaagttgatgtgaaaactaag
aaccttgtcaagaagagtagtgtttgcctcaagagagattcctcagatgaagagaatgct
gcagtgtcctggaaagctaagtatactgctcctaaattgaaacacagctctcataatcat
agcctagtccatgacagagacagtactcacaacaaacacagaaatccgaaagatgaatct
aacgaaaccaaactgtgtactgagtcttttaaaatagctgaagatgaagaaaacaagttc
tcagatccagcaagaaatccccagagttttctacaatgtcataacaaggatgaggactct
gctgactgctgggaaagtcctctccctttacgccagaggttaaagctcaggttccagaac
actcaaagtagactttataatacttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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