KEGG   Rattus norvegicus (rat): 298981
Entry
298981            CDS       T01003                                 
Symbol
Nkx1-1
Name
(RefSeq) NK1 transcription factor-related protein 1
  KO
K09309  homeobox protein Nkx-1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    298981 (Nkx1-1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: NKL
    298981 (Nkx1-1)
SSDB
Motif
Pfam: Homeodomain
Other DBs
NCBI-GeneID: 298981
NCBI-ProteinID: XP_234082
RGD: 1564874
Ensembl: ENSRNOG00000005113
Position
14:81521206..81524788
AA seq 443 aa
MSTSGPAAPGDIPALPPPPPPPEPGSGPAPPAPAATARDAMDGRAELPIFPRAGVPPLAV
SDTVPAVPDGAGAARPAAPPRPTSFSVLDILDPNKFNSRRRRCVLLGPVVPATCAPCAPA
ACVPVPAASGRSPRAELERRALSAATGVAAATGAEPTSTGDSYRADEAEANGYSSGSGRS
PTADSEDEAPEEDEDEDQAPEVQDVQGTEEPRGGSGGLGARGSGCSGAAEVEASPVDEAA
APGPRGNSPGAPGPPVTAAGAGNAGSTPQGAAVATKPKRKRTGSDSKSGKPRRARTAFTY
EQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTG
GGGGPGPGAGPGAGLPGGLSPLSPSPPMGAPLALHGPAGYPAHSPGGLVCAAQLPFLSSP
AVLSPFVLGSQTYGAPAFYAPHL
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgagtaccagcggcccggcggcacctggggacatccccgcgctgccaccgccaccgcca
ccgcccgagcccggctccgggcccgcaccaccagctcctgcggctacagctcgggacgct
atggacggacgagctgagctgcccatcttcccccgggctggagtcccaccgctagcggtt
agtgacactgtgcccgcggtgccagacggggctggagcagcccggcccgccgcgcccccg
cgccccacctccttctccgtgctggacattctagatcccaacaagttcaacagtaggaga
cgccggtgcgtgctcctgggccccgtggtgcccgctacgtgtgccccatgcgccccggcc
gcgtgcgtcccggtccccgctgcctccggacgctcgccgcgcgcagagctagaacgccga
gccctttccgccgccacaggagtcgccgcggccacgggagctgagcctacaagtactggg
gactcttacagggcggacgaggccgaggccaacggctacagcagcggcagtggtcgcagc
ccgaccgcggacagcgaggatgaagcgcctgaggaggacgaggacgaggaccaggcgccc
gaggtgcaggatgttcagggcaccgaggagcctcggggaggcagcggcggtctcggggcc
cgcgggtcgggttgctccggagcggccgaggtcgaggcttccccggtggacgaggctgcg
gccccagggccccgcgggaactcgcccggagccccgggcccgcctgtaactgctgcggga
gcggggaacgcggggagcaccccgcagggcgccgccgtggccaccaagcccaagcggaag
cgcacgggctcggactcgaagtccgggaagccgcggcgtgcgcgcaccgccttcacctac
gagcagctcgtggcgctggagaacaagtttaaggccactcgctacctgtcggtgtgcgag
cgcctcaacctggcgctgtcgctgagcctcacggagacgcaggtgaagatctggttccag
aaccgacgaaccaagtggaagaaacaaaatcctggcgctgacaccagcgcgccgaccggc
ggcggcgggggcccgggcccgggagcgggacccggcgcggggctgcccggcggcctcagt
cccctcagcccctcgccgcccatgggcgcgccgctcgctttgcacggcccggcggggtac
ccggcgcatagtccgggagggctggtgtgcgccgcgcagctgcccttcctgtccagcccg
gcggtgctctcgcccttcgtgctgggctcgcagacgtacggcgcgcccgccttctacgcg
ccccacctctga

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