KEGG   Rattus norvegicus (rat): 299112
Entry
299112            CDS       T01003                                 
Symbol
Pole2
Name
(RefSeq) DNA polymerase epsilon subunit 2
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03030  DNA replication
rno03410  Base excision repair
rno03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    299112 (Pole2)
   03410 Base excision repair
    299112 (Pole2)
   03420 Nucleotide excision repair
    299112 (Pole2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rno03032]
    299112 (Pole2)
   03400 DNA repair and recombination proteins [BR:rno03400]
    299112 (Pole2)
Enzymes [BR:rno01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     299112 (Pole2)
DNA replication proteins [BR:rno03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    299112 (Pole2)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      299112 (Pole2)
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT Gln_amidase_like
Other DBs
NCBI-GeneID: 299112
NCBI-ProteinID: NP_001162579
RGD: 1311962
Ensembl: ENSRNOG00000004242
UniProt: D4ABZ5
Position
6:complement(93410713..93448782)
AA seq 527 aa
MAPERLRSRTVSAFKLRGLLLRSEATKYLTEALQSVTELELEENLEKIIDAVEKQPLSSN
MIERSVVEAAVQECSQSVDETIEHIFNIIGAFDIPHFIYNSERKKFLPLSMTNHAAPTIF
GTARDKAELYRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGSTSKVGD
VIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEGCFEDQVFHANAF
GFPPTEPSSTTRAYYGNINFFGGPSNASVKASAKLRQLEEENKDAMFVIVSDVWLDQVQV
LEKLHVMFSGYSPAPPTCFILCGNFSSAPYGKNQVQALKDSLKSLADIICEYPSIHQSSR
FVFVPGPEDPGFGSILPRPPLAESITQEFRQRVPFSVFTTNPCRIQYCTQEIIIFREDLV
NKMCRNCVRFPSSSLDIPTHFVKTVLSQGHLAPLPLYVSPVYWAYDYTLRVYPVPDLLVI
ADKYDPFTVTNTECLCINPGSFPRSGFAFKVFYPSSKTVEDSKLQGF
NT seq 1584 nt   +upstreamnt  +downstreamnt
atggcgccggagcggctgcggagccgcacggtctcagctttcaagcttcggggcttgctg
ctcaggagtgaagccactaagtatctcactgaagctctccagtctgtcactgaattggag
ctcgaggagaacctagaaaagatcattgatgcagttgaaaagcagcccttgtcatcaaac
atgatcgaacgatctgtagtggaagcagctgtccaggagtgcagtcagtctgttgatgag
actatagaacatattttcaatatcattggagcttttgatattccacattttatatataat
tcagaaagaaaaaagtttcttcctctatcaatgactaaccatgctgcaccaaccatattt
ggaacagcaagggacaaagccgagctgtaccgtgaacgatacaccattttacaccagagg
acgcacagacatgaattgttcactcctccagtgataggctcacaccccgacgaaagtgga
agcaaattccagcttaaaacaatagaaactttgctgggtagtacgagtaaagttggtgac
gtgattgtccttggaatgataacccagttgaaagaggggaagtttttcctggaagaccct
actggaactgtacagctggaccttagtaaagctcagttccacagtggcctatacactgag
gcatgctttgtgctggccgaaggttgctttgaagatcaagtgtttcatgccaatgccttt
ggatttcctcccacggagccctctagcaccacaagggcatactatggaaatattaatttt
tttggagggccttctaatgcgtcagtgaaggcttctgcaaaactgagacagctggaagag
gagaacaaggacgccatgtttgtgattgtgtccgacgtttggttggatcaagtgcaagtg
ctggagaagcttcacgtaatgttttctggttattcccctgcacctccgacctgctttata
ctgtgcggtaacttttcatctgcaccatatggaaaaaatcaagtccaggctttgaaagat
tccctaaaatctttggcagacataatatgtgaatacccaagtatccaccaaagtagccgt
tttgtgtttgtgcctggcccggaggatcctggatttggttctattttaccaaggccgccc
cttgctgaaagcatcacacaagaattcagacaaagggtcccattttctgttttcactact
aacccttgcagaattcagtattgtacacaagaaataattatcttccgtgaagacttagtg
aataaaatgtgtagaaactgtgtccgctttcctagcagcagtttggatattcctacccat
ttcgtaaagactgtcttatctcagggacatctggctcctctccctctttacgtgtccccc
gtctactgggcatatgactacactttgagagtgtacccagtgcccgatctgctggtcatt
gcagacaagtacgatccgttcaccgtgaccaacaccgagtgcctctgcataaaccctggc
tcctttccaagaagtggatttgcatttaaagttttttacccttccagtaagacagtagaa
gacagcaaacttcagggcttttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (28)   
   UniProt (1)   
   RefSeq(pep) (27)   
DNA sequence (29)   
   RefSeq(nuc) (27)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (75)   

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