KEGG   Rattus norvegicus (rat): 299138
Entry
299138            CDS       T01003                                 
Symbol
Six4
Name
(RefSeq) homeobox protein SIX4 isoform 3
  KO
K15615  homeobox protein SIX4
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    299138 (Six4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    299138 (Six4)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain SINE
    299138 (Six4)
SSDB
Motif
Pfam: SIX1_SD Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 299138
NCBI-ProteinID: NP_001100209
RGD: 1306726
Ensembl: ENSRNOG00000007250
UniProt: D3ZAJ7 A6HC53
Position
6:complement(97538202..97551872)
AA seq 705 aa
MIASAADIKQENGMESASEGQEAHREPPLAFSPDHVACVCEALQQGGNLDRLARFLWSLP
QSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWYKARYTEAERA
RGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLA
KITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGHEDLSPHPLSGASD
GVTNLSLSSHMEPVYMQQIGNAKISLSSSGVLLNGSLVPASTSPVFLNGNSFIQGHNGVI
LNGLNVGNTQTVSLNPPKMSSNTVGNGIAMTDILGSTSQDVKEFKVLQSSAVNSAATTSY
SPSAPVSFPGLIPCTEVKREGVQTVASQDGGSVVTFTTPVQINQYGIVQIPNSGANGQFL
NGSIGFSPLQLPPVSVSASQGHLSVTPSTSDGSTFTSESATVQHGKLFLSPLTPSAVVYT
VPNSGQTVGAVKQEGLERGLVFSQLMPVNHNAQVNANLSSENLSGSGLHPLTSSLVNVSA
AHGFSLTPSTLLNPAELNPDLAESQPVSAPVASKCTVTSVSNTNYATLQNCSLIPGPDLL
SVPMTQAALGEIVPTAEEQVSHASPAVHQDFVREQRLVLQSVANLKENFLQNSENKTTNN
LMMLDSKSKYVLDGMVEPGCEDLGTDKKELAKLQTVQLDEDMQDL
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgattgcaagtgcggcggacatcaagcaggagaatgggatggaaagcgcctcggaagga
caggaggcgcaccgagaacccccgctggccttctcgccggaccatgtcgcctgcgtgtgc
gaggcgttgcagcaggggggcaacctggaccgcctggcccggttcctttggtccctgccc
cagagcgacctgctacgtggcaacgagagcctgctgaaggcgcgagcgctcgtggccttc
caccagggcatctaccctgagttgtacagcatcctcgagagccacagcttcgagtcggcc
aaccatccgctgctgcagcagctctggtacaaggcgcgctacaccgaggccgagcgagcg
cgcggccggccgctgggcgccgtggacaagtaccggctgcgcaggaaattccccttgccc
cgcaccatctgggacggcgaggagacggtgtattgtttcaaggagaagtcgcgcaacgcg
cttaaggagctctacaagcagaatcgctacccctcgcccgccgagaagcggcacctggcc
aagatcactggcctctccctcacccaggtcagcaactggttcaagaaccggcggcagcgc
gaccgaaacccctccgagacccagtccaaaagcgaatcagatggcaaccccagcactgaa
gacgaatccagcaagggacatgaggatttgtctcctcatccactttcaggcgcatctgat
ggcgtcaccaacctcagcctttctagccacatggagccagtatatatgcaacaaattgga
aatgctaagatatcattaagctcgtctggagttttgctgaatggaagcttggtacccgca
agtacttcacccgtcttccttaatggcaattcttttattcagggacacaatggagttatc
cttaatggactgaatgtgggaaatacacagacagtgtcactgaacccacccaaaatgtct
tcaaacactgtgggcaatggcatagccatgacagacatcctgggatctacctcacaggat
gtgaaagaattcaaagtcctccagagttctgctgtgaactcagcagccaccacctcctac
agccctagtgcccctgtgtcattcccagggctgataccctgtactgaagtgaaaagagaa
ggcgttcagacagtggcctcccaggatggcggctctgtagtgacttttactacaccagtg
caaattaaccagtatggcattgtccagatccctaattctggagcaaatggccagttcctt
aatgggagcattggattctctccactgcagctgcctcctgtctcagtatcagcttcacaa
ggtcatctttcggtgactccaagcacttcggatggaagcacatttacaagtgagtcggcc
acagtccagcatggtaaacttttcctgagccctcttacccccagtgcagtggtatacact
gtacctaattcaggccagactgtaggagctgtaaaacaggaaggcttagaaagaggccta
gtcttttctcagttgatgcctgtcaatcacaacgcacaagtaaatgcaaacctgtcttcg
gaaaatctctctgggagtggcctccatcctctgacctcttcgttggttaatgtgtccgcc
gcccacggtttttccctaaccccctctacactactaaatcccgctgagctaaaccccgac
cttgctgagagccagccagtgtctgcacctgtggcaagcaaatgtactgtgacatctgtc
agcaacactaactacgcaacccttcagaactgttcccttattcctggtccagacctattg
tccgtcccgatgacccaggctgccctgggtgagatagttcccacagccgaagagcaggtg
agccacgcctcgccagcagtccaccaggattttgtaagagaacagcgcttggttctgcaa
tcagtcgctaacctgaaagagaacttcttacaaaattctgagaacaaaacaacaaacaac
ttaatgatgttggactcgaaatccaagtacgtcctggacggcatggttgaacccggctgt
gaagacctgggaacggacaaaaaagagctggccaagctccaaactgtccagttggatgaa
gatatgcaagacttataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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