KEGG   Rattus norvegicus (rat): 299246
Entry
299246            CDS       T01003                                 
Symbol
Ttc8
Name
(RefSeq) tetratricopeptide repeat protein 8 isoform 1
  KO
K16781  tetratricopeptide repeat protein 8
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    299246 (Ttc8)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  BBSome
   299246 (Ttc8)
SSDB
Motif
Pfam: TPR_2 TPR_1 TPR_12 TPR_8 TPR_14 TPR_19 TPR_17 TPR_16 TPR_6 TPR_9 TPR_7 TPR_10 TPR_15 TPR_MalT ANAPC3 Coatomer_E PknG_TPR DUF5112
Other DBs
NCBI-GeneID: 299246
NCBI-ProteinID: NP_001386426
RGD: 1307769
Ensembl: ENSRNOG00000004542
Position
6:123927657..124025354
AA seq 505 aa
MGSEMEPLFRAWSYFRRRKFQLCADLCTQMLEKSPYDQAAWILKARALTEMVYVDEIDVD
QEGIAEMTLDENAIAQVPRPGTSLKLPGTNQTGGPTQAVRPITQAGRPITGFLRPSTQSG
RPGTMEQAIRTPRTAYTARPITSSSGRFVRLGTASMLTSPDGPFINLSRLNLTKYSQKPK
LAKALFEYIFHHENDVKMALDLASLSTEYSQYKDWWWKVQIGKCYYRLGMYREAEKQFKS
ALKQQEMVDTFLYLAKVYIILDQPVTALNLFKQGLDKFPGEVTLLCGIARIYEEMNNSSS
AAEYYKEVLKQDNTHVEAIACIGSNHFYSDQPEVALRFYRRLLQMGVYNCQLFNNLGLCC
FYAQQYDMTLTSFERALSLAENEEEAADVWYNLGHIAVGIGDTNLAHQCFRLALVHNNHH
AEAYNNLAVLEMRKGHIEQARALLQTASSLAPHMYEPHFNFATVSDKIGDLQRSYVAAQK
SEAAFPEHVDTQHLIKQLKQHFAML
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgggctcagagatggagccactgttccgggcctggagctattttagacgcaggaagttc
cagctctgcgccgatctatgcacgcagatgctggagaagtccccttatgaccaggcggct
tggattttgaaagcgcgagcgctgacagaaatggtgtacgtagatgaaattgacgtggac
caggaagggattgctgagatgaccctggatgaaaatgctattgctcaggtcccacgccct
ggcacatctttgaagctccctggcactaaccagacaggaggaccgactcaagctgtcagg
ccaatcactcaagctggaagacccataacgggcttccttaggcccagcacacagagtgga
agaccgggtacaatggagcaggccatcagaacacccagaacggcctacacagcacgacct
atcaccagctcatctggaagattcgtcagactggggactgcttccatgcttacaagtccc
gatggaccatttataaatttatccagactgaatttaacaaaatattcccagaaacctaag
ttggcaaaggctttatttgaatatattttccaccatgaaaacgatgttaagatggctttg
gacttggcgtccctttccacggagtattctcagtacaaggactggtggtggaaggtgcag
attggaaaatgttactacaggttaggaatgtaccgtgaagcagagaaacagttcaaatca
gccctgaagcagcaggaaatggtagatacatttctctatctggcaaaagtttatatcata
ttggatcaacctgtgactgctttaaatctattcaaacaaggcttagataagtttccagga
gaggtgaccctgctttgtggaattgccaggatctacgaggaaatgaacaacagttcgtcc
gcagcagaatactacaaagaggttctcaaacaagacaatactcatgtggaagccattgcc
tgcattggaagcaaccacttttattctgaccagccagaggttgccctccggttttacagg
cgcctcttgcagatgggagtttacaactgccagcttttcaacaacctggggctgtgctgc
ttctatgcccagcagtacgacatgactctgacctcattcgagcgcgccctttccctggcc
gagaacgaggaagaggcagctgacgtctggtacaacctggggcacattgcagtgggaata
ggagacacaaacctggcccaccagtgcttcaggctggccctggtccacaacaaccaccat
gctgaggcctacaacaacctagccgtgctggagatgcggaagggtcacattgaacaggca
cgcgcactcttacaaaccgcatcgtccttggcaccccatatgtatgagccacattttaat
tttgcaaccgtctctgataagattggagatcttcagagaagctacgtcgctgctcagaag
tctgaagccgcatttccagagcatgtggacactcagcatttaattaagcagctaaagcag
cacttcgctatgctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   UniProt (2)   
   RefSeq(pep) (9)   
DNA sequence (97)   
   RefSeq(nuc) (11)   
   GenBank (43)   
   EMBL (43)   
Protein domain (13)   
   Pfam (13)   
All databases (130)   

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