KEGG   Rattus norvegicus (rat): 299347
Entry
299347            CDS       T01003                                 
Symbol
Brf1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit
  KO
K15196  transcription factor IIIB 90 kDa subunit
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    299347 (Brf1)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase III system
   Basal transcription factors
    TFIIIB
     299347 (Brf1)
SSDB
Motif
Pfam: TFIIB BRF1 TF_Zn_Ribbon
Other DBs
NCBI-GeneID: 299347
NCBI-ProteinID: NP_001386434
RGD: 1311158
Ensembl: ENSRNOG00000014595
Position
6:complement(137854055..137902629)
AA seq 676 aa
MTGRVCRGCGGTDIELDAARGDAVCTGCGSVLEDNIIVSEVQFVENSGGGSSAVGQFVSL
DGAGKTPTLGGGFHVNLGKESRAQTLQNGRRHIHHLGSQLQLNQHCLDTAFNFFKMAVSK
HLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAPA
IDPCLYIPRFAHLLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
DFRRTVKEVISVVKVCESTLRKRLTEFEDTPTSQLTIDEFMKIDLEEECDPPSYTAGQRK
LRMKQLEQVLSKKLEEVEGEISTYQDAIEIELENSRPKAKGALANLSKDGSGEDATSSPF
CEEDTEDEELEAAASHMNKDFYRELLGADGGSEAAEDADGGSRPLALESLLGPLPTAASL
GISDSIRECISSPSGDPKDSSGDGELDLSGIDDLEIDRYILNESEARVKAELWMRENAEY
LREQKEKEARIAKEKELGIYKEHKPKKSCKRREPILASTAGEAIEKMLEQKKISSKINYS
VLRDLNSKGGGSPPRDDSQPPEHTSTKKLSRRKRAATRNSADPGTSMGKRLRPLVSAQPA
KKAAVGEALLLNSPALGAEPVKPSAVLVESGPVSYHPEEDADEEDAEEEDGEPCVSALQM
MGGNDYGCDGDEDDGY
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgacgggccgcgtctgccgcggttgcggcggcacggacatcgagttggatgcggcgcgc
ggcgacgcggtgtgcacgggctgcggttcggtgctcgaggacaacatcatcgtgtccgag
gtgcagttcgtggagaacagcggcggcggctcgtcggcagtcggccagttcgtgtcgctg
gacggtgcggggaaaaccccaaccctaggcggcggctttcatgtgaacttgggaaaggaa
tcaagagcacagaccctacagaatgggcggcgccacatccaccacctggggagccagttg
caactgaaccagcactgcctggacacagccttcaacttcttcaagatggctgtaagcaag
catcttacccgaggacggaaaatggcccatgtgattgctgcctgcctctacttggtttgc
cgaacggaaggcacacctcacatgctcctcgacctcagcgacctgctccaggttaacgtg
tatgtgctgggaaagaccttcctgctcttggcgagggagctttgcatcaacgcaccagct
atagacccatgcttgtacattccacgatttgcgcatctactggaatttggggagaagaac
catgaggtatccatgacggccctgaggcttctgcagaggatgaaaagggattggatgcac
acaggccggcgcccctctggcctctgtggagcagcacttctggttgcagccagaatgcat
gacttccggagaaccgtcaaagaagtcatcagcgtggtcaaagtatgtgagtccacattg
cggaagaggctcacagaatttgaagacactccaaccagtcagctcactattgacgagttt
atgaagattgacctggaggaggagtgtgacccgccctcatacaccgctggacagaggaag
ctgcgcatgaagcagctggaacaggtcctgtccaaaaagctagaagaagttgaaggtgag
atatccacttaccaagatgccattgaaattgagctagaaaacagtcggccaaaggctaaa
ggggctctcgccaacttgtcaaaggatggctccggtgaggacgccacatccagcccgttc
tgtgaggaagacactgaggatgaggagctcgaggctgctgccagccacatgaacaaggac
ttttaccgagagctcctgggggctgatggcggctcggaggcagcagaagacgctgatggg
ggcagcagacccctcgccctggagtccctgcttggtcccctgcccacagcagccagcctg
ggtatctcagactccatccgagagtgcatctcctcccccagtggagaccccaaagactct
tcaggggatggggagctggacctcagcggcatcgatgaccttgagattgacagatacatc
ctgaacgagtcagaagcccgggtaaaggctgagttgtggatgcgggagaatgctgagtac
ctgcgggaacagaaagagaaagaagcaagaatagcgaaggagaaggagcttggcatctat
aaggagcacaagcccaagaagtcttgcaaacgccgggagccaatcctagccagcacagcc
ggggaggccattgagaagatgctggaacagaagaaaatctccagcaagatcaactacagt
gtgctgcgggaccttaacagcaagggtgggggcagcccgcccagggacgactcacagcct
ccagagcacaccagcaccaagaagctgtcacggaggaaaagagcagctaccaggaacagt
gctgatcctgggacaagcatggggaagaggttgaggcctttggtgtctgctcagcccgct
aagaaggcagctgtgggagaggccttgctcttaaattcccctgccttgggagctgagcct
gtcaagccatcggcagtcttggtggagagtggccctgtgtcataccatcctgaggaggat
gcagatgaggaggacgccgaggaagaggatggagagccctgcgtcagtgctctgcagatg
atgggaggcaatgattatggctgtgatggtgacgaggatgatggctactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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