KEGG   Rattus norvegicus (rat): 299356
Entry
299356            CDS       T01003                                 
Symbol
Syne3
Name
(RefSeq) nesprin-3
  KO
K21761  nesprin-3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    299356 (Syne3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    299356 (Syne3)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   LINC complex
    299356 (Syne3)
SSDB
Motif
Pfam: KASH Spectrin DUF3288 NOG1_N
Other DBs
NCBI-GeneID: 299356
NCBI-ProteinID: NP_001100232
RGD: 1304563
Ensembl: ENSRNOG00000005287
UniProt: A6JER9
Position
6:complement(129637644..129729542)
AA seq 976 aa
MTQQPQEDFDRSVEDAQAWMKAVQEQLQVNDNTKGPRAALEARLRETEKICQLEPEGCIK
VELVLRAAEALLATCQEGQKPEILARLRDIKSQWEETVTYMTHCHSRIEWVWLHWSEYLL
AQDEFYRWFQKMVVTLEPPVELQLGLKEKQWQLSHAQVLLHNVDNQAVLLDRLLEEAGSL
FSRIGDPSVDEEAQKRMKAEYDAVKARAQHRVELLAQVAQDHEQYREDVSEFQLWLKALV
EKVHGCLGRNCKLATEPRLSVLQDIAKDFPRGEESLNRLEEQAVGVIRNTSPLGAERISG
ELEEMRMVLEKLRVLWKEEEGRLQGLLQSKGACEQQIQQLEVELGELKKVLQRLAQQGLE
PTVKTATEDELVAHWRLFSGTRAALASEEPRVDRLQTQLKELVIFPDLQSLSDSVVAAIQ
EYQSMKGKNARLHNATRTELWQRSQRSLNDLQLWKALAQRLLDITTSLPDLASIHTFLPQ
IEAALTESSRLKEQLSMLQLKTDLLGSIFGQERAATLLEQVTGSVRDRDLLHNSLLQRKS
KLQSLLVQHKDFGVAFDPLHRKLLDLQARIQAEKGLQRDLPGKQVQLLRLQGLQEEGLDL
GTQIEAVRSLAQGNSKYQHKVDQISSDQQALQRSLEDLVDRCQQNVREHCTFSHRLLELQ
LWITMATQTLESHQGDMRLWDAESQEAGLERLLSEIPEKEVQLSLLQALGQLVMKKSSPE
GAAVVQEELRKLMESWQALRLLEESMLSLMRNEQLQRTEVDTGKKQVFTNNIPKAGFLIN
PQDPIPRRRHGVNPPEEHDLHEDHPQLLREFEQWLQAENSKLLRITTMRTATAKDLRTRE
LKLQELEARIPEGQILFENLLRHRPARDPSNELEDLRYRWMLYKSKLKGSGDLLTESSPG
ELTAFQKSRQQKRWRSPCSLLQKACRVALPLQLLLLLFLLLLFLLPAGEEERSCALANNF
ARSFALMLRYNGPPPT
NT seq 2931 nt   +upstreamnt  +downstreamnt
atgacgcagcagccccaggaggacttcgacaggagtgtggaggatgcccaggcatggatg
aaggcagtacaggagcagcttcaggtcaatgacaacacgaaggggccccgagcagccctg
gaggcgaggctgcgagagacagagaaaatctgtcagctggagcctgagggatgcataaag
gtggaactggtcctgcgggcagctgaggccctcttggcaacttgccaggagggccagaaa
cctgagatcctggcccggctgagggatatcaagtctcagtgggaggagacggtcacctac
atgactcactgccacagtcgcatcgagtgggtgtggctgcactggagcgagtacctgctg
gcccaggacgagttttaccgatggttccagaagatggtggtcacgctggagccccccgtg
gagctgcagctgggcctgaaggagaagcagtggcagctgagccacgcccaggtgctgctg
cacaatgtggacaatcaggctgtgctcctggacaggctgctggaggaggcgggctccctg
ttcagcaggatcggggaccccagcgtggatgaagaggcccagaagaggatgaaggcagag
tacgatgccgtgaaggccagagctcagcacagggtggagctcctggcccaggtggcccag
gaccatgagcagtaccgggaggacgtgagcgagttccagctgtggctgaaggcgttggtg
gagaaggtgcacggctgcctggggcggaactgcaaactggccaccgagcctcgcctctct
gtgctgcaggacatcgccaaggatttccctaggggtgaggagtctttgaacagattggag
gagcaggctgtgggtgtcattcggaacacctctcctttgggtgcagagaggatctcaggg
gagctggaggagatgcggatggtcctggagaagctgagagtcctctggaaagaggaggaa
ggaaggctgcagggcctgctccagtccaagggggcctgtgagcagcagatccagcagctg
gaggtggaactgggagagctcaagaaagttcttcagaggctggcccagcaaggcttggag
cccacagtgaagacggccacagaggatgagctagtggcccactggaggctgttctcgggg
actcgggctgcactggcttcagaggaaccccgtgtagaccggttacaaactcaactaaag
gaacttgtcatcttcccggacctgcagtcactctctgatagcgtggtggctgccattcag
gaataccaaagtatgaagggtaagaatgccaggctccacaatgcgaccaggacggagcta
tggcagcgttcccagcggtccctcaatgacctgcagctatggaaggcgctggcccagagg
ctcctggacatcaccaccagcctgccggacctggcctccattcacacttttctaccccag
attgaggcagccctaacagaaagctcccgcctgaaagagcagctgtcaatgctgcagctg
aagacagacctgctgggcagcatctttggccaggagagagcagccaccctcctggagcag
gtgacaggctctgtgagggacagagacctactgcataacagccttcttcagcggaagagc
aaacttcagagcctgcttgttcagcacaaggactttggggtagcttttgatcctctgcac
aggaagctcctagacctccaagccaggatccaagcagagaaagggcttcagcgggacctt
cctggaaagcaggtccagctcctaaggttgcaggggctgcaggaggaggggctggatctg
gggacacagatcgaggctgtgagatctcttgcccaggggaactctaagtaccagcacaag
gtagaccagatctcctctgaccagcaagccctgcagaggtccctggaggaccttgtggac
aggtgccagcagaatgtacgggaacactgtaccttcagtcacaggctgttggagctccag
ctgtggatcaccatggccacacagacgttggagtcacaccaaggggatatgcgtctgtgg
gatgcagagtcccaagaggctggactcgagaggctgctgtctgaaatcccagagaaagag
gtccagctctccctgctccaagcactgggccagcttgtgatgaagaagtcttctccagaa
ggggcagccgtggtccaggaggagctgaggaagctgatggagtcttggcaggccttgcga
ctgctagaggagagcatgctgagtctcatgaggaacgagcagctgcagaggacggaggtg
gacacggggaagaagcaggttttcaccaacaacatcccaaaggctggctttctcatcaac
cctcaggatcccattcccaggagacggcatggggtgaacccaccagaagaacacgacctc
catgaagatcatccccagctcctgagggaatttgaacagtggctacaggcagaaaactcc
aagctacttagaatcaccacaatgagaacagccacagccaaggacttgaggaccagagag
cttaagctgcaggagctggaggctcggatcccagaaggacagatcctctttgagaacctg
cttcgtcacagaccagcaagggacccctccaatgagctggaagatctgcgataccggtgg
atgctctacaagtccaagctcaagggctccggcgacctgctgacggagagttctccaggg
gagctgactgcattccagaagagtcggcagcagaagcggtggcggagtccctgctctctc
ctacagaaagcatgccgcgtggcactgccgttgcagcttctgctcctgctctttctgctg
ctgctgttcctgttgccagcgggcgaggaggagcgcagctgcgccctggccaacaacttc
gctcgctcttttgcgctcatgctgcggtacaacggccctccgcccacctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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