KEGG   Rattus norvegicus (rat): 299802
Entry
299802            CDS       T01003                                 
Symbol
Lgr5
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5 precursor
  KO
K04308  leucine-rich repeat-containing G protein-coupled receptor 5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    299802 (Lgr5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:rno04030]
    299802 (Lgr5)
G protein-coupled receptors [BR:rno04030]
 Rhodopsin family
  Others
   R-spondin
    299802 (Lgr5)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_5 LRR_1 7tm_1 LRR_9 LRRNT DHU1_N
Other DBs
NCBI-GeneID: 299802
NCBI-ProteinID: NP_001100254
RGD: 1307733
Ensembl: ENSRNOG00000004221
UniProt: D4AC13
Position
7:complement(52973151..53107964)
AA seq 907 aa
MDTSRVRMLLSLLALLQLVAAGSPPRPDTMPRGCPSYCHCELDGRMLLRVDCSDLGLSEL
PSNLSVFTSYLDLSMNNISQLPASLLHRLRFLEELRLAGNALTHIPKGAFAGLHSLKVLM
LQNNQLRQVPEEALQNLRSLQSLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTDVPVQ
AFRSLSALQAMTLALNKIHHIADHAFGNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLD
LNYNNLDEFPTAIKTLSNLKELGFHSNNIRSIPERAFVGNPSLITIHFYDNPIQFVGISA
FQHLPELRTLTLNGASQITEFPDLTGTATLESLTLTGAKISSLPQTVCDQLPNLQVLDLS
YNLLEDLPSLSGCQKLQKIDLRHNEIYEIKGGTFQQLFNLRSLNLARNKIAIIHPNAFST
LPSLIKLDLSSNLLSSFPVTGLHGLTHLKLTGNRALQSLIPSANFPELKIIEMPYAYQCC
AFGGCENVYKIPNQWNKDDSSSVDDLRKKDAGLFQVQDERDLEDFLLDFEEDLKVLHSVQ
CSPPPGPFKPCEHLFGSWLIRIGVWTTAVLALSCNALVAFTVFRTPLYISSIKLLIGVIA
VVDILMGVSSAILAVVDTFTFGSFAQHGAWWEGGIGCQIVGFLSIFASESSVFLLTLAAL
ERGFSVKCSSKFEMKAPLSSLKAIILLCVLLALTIATVPLLGGSEYNASPLCLPLPFGEP
STTGYMVALVLLNSLCFLIMTIAYTRLYCSLEKGELENLWDCSMVKHTALLLFTNCILYC
PVAFLSFSSLLNLTFISPEVIKFILLVIVPLPACLNPLLYIVFNPHFKEDMGSLGKQTRF
WTRAKHPSLLSINSDDVEKRSCDSTQALVSFTHASIAYDLPSDSGSSPAYPMTESCHLSS
VAFVPCL
NT seq 2724 nt   +upstreamnt  +downstreamnt
atggacacctcccgcgtccgcatgctcctgtccttgctggcgctgctgcagctggtggct
gccggcagcccaccgagaccggacacgatgccgcggggctgcccatcatactgtcactgt
gagctggatggcaggatgctgctcagggtggactgctccgacctggggctctcggagctg
ccctccaacctcagcgtcttcacctcctacctggacctcagtatgaacaacatcagtcag
ctacctgccagtctcctgcatcgcctccgcttcctagaagagttgcgtcttgctggaaat
gctttgacacacattcccaagggagcattcgcaggccttcacagtctcaaagttctcatg
ctgcagaataaccagctgagacaggttccggaggaagcgctacagaacctgagaagcctt
cagtccctgcgcttggatgccaaccacatcagctacgtgccacccagctgtttcagtggt
ctgcactccctgaggcacctgtggctagatgacaacgctctcacagatgtccctgtccag
gctttcagaagtttatcagccctgcaagccatgaccttggccctgaacaaaatacaccac
atagcagaccatgcctttggaaacctctccagcctcgtggttctgcatctccataataat
agaatccactccctgggaaagaaatgctttgatggactccacagcctggagactttagat
ttaaattataataaccttgacgaattccccactgcaatcaagacactctccaacctcaag
gaactaggattccacagcaacaatatcagatcaataccagagcgagcattcgtaggcaac
ccttctcttatcacaatacatttctatgacaatcccatccagtttgttggaatctctgct
tttcaacacttgcctgaactaagaacgctgactttgaatggtgcctcgcaaattactgaa
ttccctgacttaacggggaccgcaaccctggagagcctgactttaactggagcaaagatc
tcgtctcttccccaaaccgtctgtgatcagttacctaatctccaagtgctagatttgtct
tacaacctgctcgaagacttacccagtttgtcgggctgccaaaagcttcagaaaattgac
ctgcggcataatgaaatctatgaaattaaaggtggcacttttcagcagttgttcaacctc
cgatctctgaacttagcccggaataaaattgccattattcaccccaacgctttctctacg
ttgccgtctctaataaagctggacctatcatccaacctcctttcgtctttccctgtgact
gggttacacggtttaactcacttaaaattaacggggaaccgcgccttgcagagcctgata
ccatctgcaaacttcccggagctcaagattatagaaatgccatacgcttaccagtgctgt
gcatttggggggtgtgagaatgtctataaaattcctaatcaatggaacaaagatgacagc
agcagtgtggacgaccttcgtaagaaagatgctggcttatttcaagttcaagatgagcgg
gaccttgaagacttcctacttgactttgaggaagacctgaaggttcttcactccgtgcag
tgctcacctcccccaggtcccttcaagccctgtgagcacctgtttggtagctggctgatc
cgaatcggggtgtggaccacagcagtcctggcgctttcctgcaatgccttggtggctttc
acagtgttcagaacccctctgtacatctcttccataaaactgctaatcggggtaattgcg
gtagtggacatactcatgggggtctccagtgcaattctggctgtcgtggacacgttcact
tttggcagttttgctcaacacggtgcatggtgggaaggtggaattggctgccaaattgtt
ggttttttgtccatttttgcttccgaatcatcggtcttcctgctcactctggcggcactg
gaacgtggtttttctgtcaagtgctcttcaaagtttgaaatgaaagctcccctttctagc
ctgaaagcgatcattttgctgtgtgtcctcttggccctgaccattgccaccgtccccttg
ctaggaggcagtgagtacaatgcctctcccctctgcctgcccttaccctttggggagccc
agcaccacaggctacatggtggctctcgtattgctcaactccctctgtttcctcataatg
accattgcctatacaaggctctactgcagtttggagaagggagagctggagaacctttgg
gactgttctatggtgaagcacactgctctgttgctcttcaccaactgtatcctttactgc
cccgtggctttcttatccttctcctctttgctaaacctcacgtttatcagtcccgaagta
attaaatttatacttctagtgattgtcccacttccggcatgcctcaacccccttctctac
attgtcttcaacccccattttaaggaggatatgggcagcctgggaaagcaaacccgtttc
tggacaagagcaaaacacccaagtctgctgtccattaactcggacgatgttgagaaacgg
tcctgtgactcaacccaagccttagtatcctttacccacgccagcatagcctatgacttg
ccttccgattccgggtcatcaccagcttacccaatgactgaaagctgtcacctctcttca
gttgcatttgtcccatgtctctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system