KEGG   Rattus norvegicus (rat): 299851
Entry
299851            CDS       T01003                                 
Symbol
Mars1
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
  KO
K01874  methionyl-tRNA synthetase [EC:6.1.1.10]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00450  Selenocompound metabolism
rno00970  Aminoacyl-tRNA biosynthesis
rno01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    299851 (Mars1)
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    299851 (Mars1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rno01007]
    299851 (Mars1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    299851 (Mars1)
Enzymes [BR:rno01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.10  methionine---tRNA ligase
     299851 (Mars1)
Amino acid related enzymes [BR:rno01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   299851 (Mars1)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    299851 (Mars1)
 Prokaryotic type
   Other AARSs
    299851 (Mars1)
SSDB
Motif
Pfam: tRNA-synt_1g GST_N_5 Anticodon_3 WHEP-TRS tRNA-synt_1 GST_C GST_C_2 GST_C_3 GST_N_2
Other DBs
NCBI-GeneID: 299851
NCBI-ProteinID: NP_001121131
RGD: 1305321
Ensembl: ENSRNOG00000025459
UniProt: D3Z941
Position
7:complement(65006456..65023880)
AA seq 902 aa
MRLFVSEGSPGSLPVLAAAARARGRAELLISTVGPEECVVPFLTRPKVPVLQLDSGNYLF
SASAICRYFFLLCGWEQDDLTNQWLEWEATELQPVLSAALYCLVVQGKKGEDVLGPLRRV
LTHIDHSLSRQNCPFLAGDTESLADIVLWGALYPLLQDPAYLPEELGALQSWFQTLSTQE
PCQRAAETVLKQQGVLALRPYLQKQPQPQPLPPEGRAVSNEPEEEELATLSEEDIIAAVA
AWEKGLENLPPLQPQQHPVLPVPGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYS
RLRQWNTLYLCGTDEYGTATETKAMEEGLTPQEICDKYHAIHVDIYRWFNISFDTFGRTT
TPLQTKITQDIFQRLLTRGFVLQDTVEQLRCEQCARFLADRFVEGVCPFCGYEEARGDQC
DKCGKLINAIELKRPQCKVCRSHPVVKSSKHLFLDLPKLEKRLEDWLGKTMPGSDWTPNA
RFIIRSWLRDGLKPRCITRDLKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWER
WWKNPEQVDLYQFMAKDNVPFHGLVFPCSALGAEDNYTLVKNLIATEYLNYEDGKFSKSR
GIGVFGDMAQDTGIPADIWRFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAG
MFVSKFFGGCVPEMVLTHDDRRLVAHVSWELQRYHQLLEKVRIRDALRSILTISRHGNQY
IQVNEPWKRIKGDEMDRQRAGTVTGMAVNIAALLSVMLQPYMPTVSSTIQTQLQLPEAAC
RILATSFICTLPAGHRIGTVSPLFQKLENDQIENLRQRFGGGQAKGSPKPAVVEAVTTAG
SQDIQVLVDEVTKQGNIVRELKAQKADKNQVAAEVAKLLDLKKQLALAEGKPIETPKGKK
KK
NT seq 2709 nt   +upstreamnt  +downstreamnt
atgaggctgttcgtgagcgaaggctccccgggtagcctgccggtgctggctgcggccgcg
agggcccggggccgggcggagctgctcatcagcaccgtaggccccgaagagtgtgtggta
ccatttcttacccggcctaaggtccctgtcttgcagctggatagcggcaactacctcttc
tctgctagtgcaatctgccgatatttttttctgttatgcggctgggaacaagatgatctt
accaaccaatggctggaatgggaagcaacagaactgcagccggttctgtctgctgcccta
tactgtctagtggttcaaggcaaaaaaggggaagatgtacttggcccacttcggagagtc
ctgactcacattgatcacagcttgagtcggcaaaactgtcctttcttggcaggggacaca
gaatctctagctgacattgttttgtggggagcactatatcctttactgcaagacccagct
tacctccctgaggagttgggtgccctacaaagctggttccagacactaagtacccaggag
ccatgtcagcgagctgcagagactgtgctgaaacagcagggtgtcctggcactgcgtccc
tacctccaaaaacagccccagccccagcccctacctcctgaggggagagctgtcagcaat
gaacctgaggaggaagagctggctaccctgtctgaggaggacatcattgctgctgttgct
gcttgggagaagggtctggaaaacttacctccactacagccccagcagcatccagtgttg
cctgtgcctggagaaaggaatgtgctcatcacgagtgccctcccttatgtcaacaatgtc
ccccaccttggaaacatcattggctgtgtgctcagtgctgatgtctttgcaaggtactct
cgccttcgccagtggaacaccctctatctgtgtggcacagatgagtatggtactgcgaca
gagaccaaggccatggaagagggtctaaccccacaagaaatctgtgacaaataccacgcc
atacatgttgacatctaccgctggttcaatatatcgtttgatacgttcggtcgcacaacc
actcctctgcagaccaaaatcacacaggacatcttccagaggttgctgacacggggtttt
gtgctgcaagatactgtagagcagcttcgctgtgagcagtgtgcacgtttcttggctgac
cgctttgtggagggagtgtgtcccttttgtggctatgaagaggcccggggtgaccagtgt
gacaagtgtggcaagctcatcaatgccattgagctcaagagacctcagtgcaaagtctgc
cgctcccaccctgtggtgaagtcctcaaagcacctgtttctagacttgcctaagttagag
aagcgcctggaggactggctggggaagacgatgcctggcagtgactggacacccaatgcc
aggttcattattcgatcctggcttcgagatggactcaagccacgatgcatcaccagagac
ctcaaatggggaactcctgtgcccttggaaggttttgaggacaaggtattttatgtctgg
tttgatgctactattggctatctgtccatcacagccaactacacagaccagtgggagaga
tggtggaagaatccagaacaagtggacctttaccagttcatggccaaagacaatgttccc
ttccatggcttggtctttccttgttcagccctaggagctgaggataactacaccttagtc
aagaacctcatcgctacagaatacctgaactacgaggacgggaagttctctaagagccgg
gggataggagtgtttggagacatggcccaagatacagggatccctgctgacatctggcga
ttctatctgctatacattcggcctgagggccaggacagtgccttctcctggacagacttg
ctgattaaaaacaattctgagctgcttaacaacctgggcaacttcatcaatagagctggc
atgttcgtgtctaagttttttgggggttgtgtgcctgagatggtgctgacccacgatgac
agacgcctggtggcacatgtctcctgggaactccagcgctatcaccagctgttggaaaag
gttcggatccgggatgccttgcgcagtatccttaccatatctcggcatggcaaccaatat
attcaagtgaatgagccctggaaacggattaaaggcgatgagatggacaggcagcgggca
ggcacggtgacaggaatggcagtgaacatagctgccttgctgtctgtcatgctccagccg
tacatgcccacagtcagctccaccattcagacccagctccagctcccagaggcagcctgc
cgcatccttgccacaagcttcatttgtaccttaccagcaggccaccgaattggcacagtc
agtcctttgttccagaaattggaaaatgaccagattgaaaatttgaggcagcgctttgga
gggggccaggctaaagggtcccccaagccagcagttgttgaggcagttactacagcaggg
tcgcaggacatacaagtgctggtggatgaggtaaccaaacagggaaacatagttcgggaa
ctgaaagcacagaaggcagacaagaaccaggttgctgcagaagtggctaaactcttggat
ctaaagaaacagttggctttggctgaggggaagcccattgaaactccgaaaggcaagaag
aaaaagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (9)   
   Pfam (9)   
All databases (41)   

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