KEGG   Rattus norvegicus (rat): 299940
Entry
299940            CDS       T01003                                 
Symbol
Sntb1
Name
(RefSeq) beta-1-syntrophin
  KO
K24064  beta-syntrophin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04820  Cytoskeleton in muscle cells
rno05410  Hypertrophic cardiomyopathy
rno05412  Arrhythmogenic right ventricular cardiomyopathy
rno05414  Dilated cardiomyopathy
rno05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    299940 (Sntb1)
 09160 Human Diseases
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    299940 (Sntb1)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    299940 (Sntb1)
   05414 Dilated cardiomyopathy
    299940 (Sntb1)
   05416 Viral myocarditis
    299940 (Sntb1)
SSDB
Motif
Pfam: PH_17 PDZ PH PDZ_2 PDZ_6
Other DBs
NCBI-GeneID: 299940
NCBI-ProteinID: NP_001124014
RGD: 1307728
Ensembl: ENSRNOG00000004821
UniProt: A6HRH8 D3ZWC6
Position
7:complement(88950642..89219017)
AA seq 539 aa
MAVAAAAAAVAAPAGGGGARAQRSGLLEVLVRDRWHKVLVNLSEDALVLSCEEGATAYNG
IGTTTNGSFCRGSGTGHPGTGVPQAPDSPAGVRTAFTDLPEQVPESISNQKRGVKVLKQE
LGGLGISIKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGADLRDATHDEAVQA
LKRAGKEVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGSGSADPLSSQPFSFHR
DRKSIPLKMCYVTRSMTLADPENRQLEIHSPDAKHTVVLRSKDSATAQAWFSAIHSNVGD
LLVRVVADIREQLGKTGIAGSREIRHLGWLAEKVPGESEKQWKPALVVLTEKDLLIYDSM
PRRKEAWLSPVHSYPLLATRLVHSGPGKGSPQAAMDLSFATRTGTKQGIETHLFRAEISR
DLSHWTRSIVQGCHNSAELTAEITTACTYRNQECRLTIHYDNGFSISTEPQDGAFPKTII
QSPYEKLKMSSDDGIRMLYLDFGGKEGEIQLDLHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggcggtagcggcagcggcagcggctgtggctgcgccggctggcggtggaggcgcccgg
gcgcagcggagcggactgttggaagttttggtgcgggatcgctggcataaagttctggtg
aacttgagcgaggacgccctggtgttgagctgcgaggagggcgctacggcgtacaacggc
atagggactaccaccaatggttcgttctgcaggggctccgggaccgggcacccgggcact
ggtgtgcctcaagccccggactctcctgccggggtccgcaccgccttcaccgacctgcca
gagcaggtgcctgagtccatctcaaaccagaagaggggcgtgaaggtcctgaagcaggag
ctgggcgggctgggcattagcatcaaagggggcaaggaaaacaagatgcccatactcatc
agcaagatcttcaaggggctggcagccgatcagacccaagccctgtacgtgggcgatgcc
atcctgtcagtgaatggagcagacctgcgggacgccacccacgacgaggcagtacaggcg
ctgaagcgcgcaggcaaggaagtgctgctggaagtgaagtacatgagagaagccacacct
tacgtgaagaaaggatcccctgtgtctgagattggatgggaaacacctccacctgagtcc
ccaagattagggagtggctctgcagatcctctgtcatcccagcccttctccttccataga
gaccggaaaagcatccccctcaagatgtgttatgtcacccggagcatgactttggctgac
cctgaaaacaggcagcttgaaattcactcgccagatgctaagcacacagtggtcctgagg
agtaaggactctgccactgcccaagcctggttcagtgctatccattccaacgttggtgac
ttgctggtccgtgtggttgctgacatcagggagcagctggggaagacaggtattgctggc
agtcgtgagatcaggcatcttggctggcttgcagaaaaggtacctggagagagtgagaaa
cagtggaaaccagccctggttgttctgactgagaaggatcttctaatctatgacagcatg
ccgcggaggaaagaggcctggcttagcccagtacattcgtacccacttcttgccaccagg
ttggtccattcgggcccagggaaaggatcacctcaggctgctatggacctgtcctttgca
actcgaactggtaccaagcaaggaattgaaacacatctcttcagggcagagatcagcagg
gacctctcccactggacaaggagcatagtacaggggtgccacaattcagcagagctcact
gctgaaatcaccaccgcctgcacctacagaaaccaggaatgccgcttgaccatacattac
gacaatggattttctatttccactgagcctcaggatggtgcctttcccaagacaatcata
cagtccccttatgagaagctcaaaatgtcttcggatgatggaatcaggatgctctattta
gactttggaggcaaagaaggagagattcaactggaccttcactcctgccccaagcccatc
gttttcatcatccattcctttctgtctgctaagatcacacgactgggcttggtggcctga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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