KEGG   Rattus norvegicus (rat): 300045
Entry
300045            CDS       T01003                                 
Symbol
Exosc4
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    300045 (Exosc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    300045 (Exosc4)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     300045 (Exosc4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     300045 (Exosc4)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 300045
NCBI-ProteinID: NP_001128332
RGD: 1310986
Ensembl: ENSRNOG00000012348
UniProt: D4A4Y0
Position
7:109928491..109931233
AA seq 245 aa
MAGLELLSDQGYRIDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG
SRSRALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQ
IDIYVQVLQADGGTYAACVNAATLAVMDAGIPMRDFVCACSAGFVDGTALADLSHVEEAA
GGPQLALALLPASGQIALLEMDSRLHEDHLEQVLEAAAQAARDVHTLLDRVVRQHVQEAS
ILLGD
NT seq 738 nt   +upstreamnt  +downstreamnt
atggccgggctggagctcctgtccgatcagggttaccggatagacggtcgccgcgcgggg
gagctgcgcaagattcaggcgcggatgggcgtgtttgcgcaggccgatggctcggcttat
atcgagcagggcaacaccaaggcactggcggtggtctacgggcctcacgagatccggggc
tcccggtcacgggctctgcctgaccgggctctagtgaactgtcagtacagttcagcaacc
ttcagcacaggtgagcgcaagcgaaggcctcatggagaccggaagtcttgtgagatgggg
ctgcagctacgccagaccttcgaggcagctatcctcacacagctgcacccacgttctcag
atagacatttatgtgcaggtgctacaagcagacggtgggacctatgcagcatgtgtgaat
gcagccacgctagcagtgatggatgctgggatacccatgcgggactttgtgtgtgcatgt
tcggctggttttgtggatggcacagcactagcggacctcagtcacgtggaggaagcagct
ggcgggccccagctagccctggccctgctgccagcctctggccagattgcactgcttgag
atggattcgaggttgcatgaagaccacttggagcaggtgctcgaggctgctgcccaggca
gcccgggatgtgcacactctgctggatcgtgttgtccggcagcatgtgcaggaggcctct
atcttactgggggactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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