KEGG   Rattus norvegicus (rat): 300050
Entry
300050            CDS       T01003                                 
Symbol
Bop1
Name
(RefSeq) ribosome biogenesis protein BOP1
  KO
K14824  ribosome biogenesis protein ERB1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    300050 (Bop1)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    300050 (Bop1)
SSDB
Motif
Pfam: BOP1NT WD40 ANAPC4_WD40 NBCH_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 300050
NCBI-ProteinID: NP_001019421
RGD: 1310589
Ensembl: ENSRNOG00000021773
UniProt: Q562C2
Position
7:complement(110052716..110076529)
AA seq 731 aa
MAGACGKHHMSPGSLPGKRRLEPDQEPQIQEPLLLSDPDSSLSDSEESVFSGLEDSGSDT
SDEDTEEVARAGCDKDNRTEKTSEEQEQAVPPCPRAEEAGALTRDEYEEDSSDEEDIRNT
VGNVPLAWYDDFPHVGYDLDGKRIYKPLRTRDELDQFLDKMDDPDFWRTVQDKMTGSDLR
LTDEQVALVHRLQRGQFGDSGFDPYEPAVDFFSGDIMIHPVTNRPADKRSFIPSLVEKEK
VSRLVHAIKMGWIKPRRPPDSTPSFYDLWAQEDPNAVLGRHKMHVPAPKLALPGHAESYN
PPPEYLPTEEERLAWMQQEPIERKLNFLPQKFPSLRTVPAYGRFIQERFERCLDLYLCPR
QRKMRVNVDPEDLIPKLPRPRDLQPFPVCQALVYRGHSDLVRCLSVSPGGQWLASGSDDG
TLRLWEVATARCMKTVRVGGVIRSIAWNPNPTICLVAAAMDDAVVLLNPALGDRLLVGST
DQLLETFTPPEEPTLQPAHWLEVSEEERQRGLRLRICHSKPVTQVTWHGRGDYLAVVLSS
QGHTQVLIHQLSRRRSQSPFRRSHGQVQCVAFHPTRPFLLVASQRSIRIYHLLRQELTKK
LMPNCKWVSSMAVHPAGDNIICGSYDSKLVWFDLDLSTKPYKVLRHHKKALRAVAFHPRY
PLFASGSDDGSVIVCHGMVYNDLLQNPLLVPVKVLKGHSLTRDLGVLDVAFHPTQPWVFS
SGADGTIRLFS
NT seq 2196 nt   +upstreamnt  +downstreamnt
atggcgggggcgtgtggtaagcaccacatgtcaccgggatcgctgccagggaaacggcgt
ttggaacctgatcaggagccacagatacaagagcctcttctcctcagcgaccctgactcc
agtctctctgacagcgaggagagtgtgttttcaggccttgaagattctggcagtgacacg
agtgacgaggacactgaagaagtggccagagctggttgtgacaaagacaatagaacagag
aagacctctgaggagcaggaacaggctgtgcccccttgcccaagggcagaggaagcaggt
gctctgaccagagatgagtatgaagaggacagctctgatgaggaggacattcggaacacc
gtgggcaatgtgcccctggcgtggtatgacgatttcccacatgtgggctatgacctggac
ggcaaacgtatctataagcccctgcggacacgagatgagctggaccagtttctggacaaa
atggatgacccagatttctggcgcactgtgcaagacaagatgacagggagtgatcttcgg
ctgactgatgagcaggttgccctggtacatcggcttcagagaggccagtttggagattca
ggctttgacccctatgagccagctgtggatttcttcagtggtgacatcatgatccacccc
gtgaccaaccgcccagctgacaaacgtagtttcatcccgtccctagttgagaaggagaag
gtgtctcgattggtgcatgccatcaagatgggttggatcaagcctcgacggccccccgac
tccactcctagcttctatgacctgtgggcccaggaggatccaaatgctgtgttggggcgc
cacaagatgcacgtgcctgcacccaagctggccctgcccggccatgcggagtcttacaac
ccacctcccgagtacctgcccactgaggaggagcgcttggcatggatgcagcaggagccc
attgagaggaagcttaacttcttaccacagaagttccccagcctgaggacagtgcctgct
tatggccgcttcatccaggagcgttttgaacgctgtcttgatttgtatctgtgcccacgg
cagcgcaagatgagggtgaatgtggatcccgaagacctcatccccaagctccctcggcca
agagaccttcagcctttccctgtgtgccaggcccttgtctacaggggccacagcgacctt
gtccgttgcctcagtgtctccccagggggccagtggctagcttcaggttcagacgacggc
acattgaggctttgggaggtggccactgcccgctgcatgaagacggtgcgtgttggaggt
gtgatacggagcattgcttggaaccccaatcccaccatatgcttagtagccgctgccatg
gatgatgccgtggtgctgctgaacccagccctgggggaccggctgctggtgggcagcaca
gaccagctgctggaaaccttcactccccctgaagagccaactttgcagcctgcccactgg
ctggaggtctcagaggaagaacgccagaggggccttcgactacgtatctgccacagtaaa
ccagtgacacaggtgacctggcatgggcgaggggactacctggctgtggtgctgtccagc
caagggcacactcaagtgctgatccaccagctgagcagaaggcgcagccagagcccattc
cgccgcagccacggacaggtgcagtgtgtggctttccatcccacgcggcccttcctgctt
gtggcctcccagcgcagcatccgcatttaccacctgctacgccaggagcttacgaagaag
ctgatgcctaactgcaagtgggtgtctagcatggctgtgcatccagcaggtgacaacatc
atctgtggcagctatgacagcaaactggtgtggtttgacctggatctttccaccaagcca
tacaaagtgctgaggcaccacaagaaggccttgcgggctgtggccttccacccccgatac
ccactctttgcatccggctcagacgacggcagcgttatcgtttgccatggcatggtgtac
aatgacctgctgcagaacccattgctggtgcccgtcaaggtgcttaagggacacagcctg
acccgagatctgggtgtactggatgtggccttccaccccacacagccatgggtcttctcc
tccggggcagatggcaccattcgactcttcagctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system