KEGG   Rattus norvegicus (rat): 300077
Entry
300077            CDS       T01003                                 
Symbol
Gtpbp1
Name
(RefSeq) GTP-binding protein 1
  KO
K24887  GTP-binding protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    300077 (Gtpbp1)
   03016 Transfer RNA biogenesis [BR:rno03016]
    300077 (Gtpbp1)
   03012 Translation factors [BR:rno03012]
    300077 (Gtpbp1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     300077 (Gtpbp1)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    300077 (Gtpbp1)
Translation factors [BR:rno03012]
 Eukaryotic type
  Elongation factors
   Elongation associated factors
    300077 (Gtpbp1)
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D2 GTP_EFTU_D3 MMR_HSR1 Dynamin_N DO-GTPase2
Other DBs
NCBI-GeneID: 300077
NCBI-ProteinID: NP_001186244
RGD: 1306758
Ensembl: ENSRNOG00000014634
UniProt: D2XV59
Position
7:113128645..113153094
AA seq 669 aa
MAAERSRSPVDSPVPASMFAPEPSSPGAARAAAAAARLHGGFDSDCSEDGEALNGEPELD
LTSKLVLVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGLSEADMEASYATV
KSMAEQIEADVILLRERQESGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVL
THGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKI
CEKSSKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALN
VPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMC
PIFQISNVTGENLDLLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGL
IKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMV
SPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKATV
HFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLS
KREEGGPSGVPAAGPPSTGDEASSLGTTQAATSSGLQPQPKPSSGGRRRGGQRHKVKSQG
ACVTPASGC
NT seq 2010 nt   +upstreamnt  +downstreamnt
atggcggcggagcggagtcgctccccggtggactcgccggtgccggcctcgatgttcgcc
cccgagcccagctctccgggggcggcccgggccgccgcggccgcggcccgactccacggc
ggcttcgactccgactgcagcgaggacggcgaggcgctcaacggcgagccggagctggac
ctcaccagcaagctggttctagtgagccctacatcagagcagtatgacagtctacttcgg
cagatgtgggagaggatggacgagggatgcggagagaccatatatgtcattgggcaggga
tcagatgggactgagtacgggctgagtgaggctgacatggaggcctcctacgccacagtg
aagagcatggcggagcagatagaggctgacgtcatcctcctgcgggaacgtcaagaatcg
ggtggccgtgtgcgtgattacttagtcaggaaacgagtcggagacaatgacttcctggag
gtcagggtggcagtggtgggcaacgtggatgctggcaaaagcacactcctgggagtccta
acacatggggagctggacaatggccggggctttgcccgccaaaaactctttcgccacaaa
catgagattgaatctggtcgaaccagcagcgtgggcaatgacattctgggctttgacagt
gaaggcaatgtggtgaacaagcccgacagccacggcggcagccttgagtggacaaagatc
tgtgagaagtcctccaaagtgatcaccttcattgacttggctggccacgagaagtacctt
aagaccactgtttttggcatgactggccatttgcctgacttctgcatgctcatggtgggc
agcaatgctggcatcgtggggatgaccaaggagcacctgggcttggcactggcactcaat
gtacctgtctttgtggttgtcaccaagattgacatgtgtcctgccaacatccttcaagaa
accctgaagctgctacagcgtctgctgaagtcaccaggctgccggaagatccctgtcttg
gtgcagagcaaagatgatgtcattgtcacagcctccaacttcagctctgagaggatgtgc
ccgatattccagatctccaatgtcacaggtgagaaccttgatctgctcaagatgttcctc
aacctcctgtccccccgcaccagctacagggaggaagaacctgctgagttccagatagat
gatacctactctgttcctggtgtggggacagtggtgtctgggaccacactgcggggcctg
atcaaactgaatgacacactgctgctgggcccagaccctttgggtaacttcctgtccatt
gctgtcaagtcgatccatcgcaagcgaatgcctgtcaaggaggtacgggggggccagaca
gcctcctttgcactgaagaagatcaagcgctcatccatccggaaaggcatggtgatggtt
tccccacgcctgaatccccaggcctcctgggagtttgaggctgagattcttgtcctccac
caccccaccacaattagtccacgataccaagccatggtgcactgtgggagcatccggcag
acagctacaattctgagcatggataaagactgtctgcgcacaggagataaagccactgtc
cacttccgcttcatcaagacccctgagtacctgcacattgaccagcggttggtgttccgg
gaaggtcgaaccaaggctgttggcaccatcaccaagctcctccagacaaccaacaactcc
cccatgaactccaagccccagcagattaaaatgcagtccacaaaaaagggtcccctgagc
aaacgagaagaaggtggtccatctggtgtgccagcggcagggcccccctcaactggagat
gaggcttcctcgctagggactacacaagctgccacatccagtggtctccagccacagccc
aagcccagcagtgggggccggcgacgagggggccagcgccacaaggtgaagtcccagggg
gcctgtgtgactcctgccagcggctgctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (42)   

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