KEGG   Rattus norvegicus (rat): 300208
Entry
300208            CDS       T01003                                 
Symbol
Ddx23
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
  KO
K12858  ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    300208 (Ddx23)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    300208 (Ddx23)
Spliceosome [BR:rno03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    300208 (Ddx23)
 Complex C
   U5 SnRNP specific factors
    300208 (Ddx23)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19
Other DBs
NCBI-GeneID: 300208
NCBI-ProteinID: NP_001100263
RGD: 1308685
Ensembl: ENSRNOG00000060154
UniProt: A6KC96 B5DFJ3
Position
7:complement(131676636..131693917)
AA seq 819 aa
MAGELADKKDRDASPKEERKRSRTPERDRDRDRDRKSSPSKDRKRHRSRDRRRGGSRSRS
RSRSKSTERERRHKERERDKERDRSKKERERDKDGHRRDKDRKRSSLSPGRGKDFKSRKD
RDSKKGDEDEHGDKRPKIQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEV
EERQKMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREEK
DKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLGR
GFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKK
LDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQA
IPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELA
QQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLS
RCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQ
TVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQ
GFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVAT
DVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQ
AILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
NT seq 2460 nt   +upstreamnt  +downstreamnt
atggcaggagaactggctgacaagaaggaccgagacgcatcacccaaggaagaaaggaag
cgatcgcggactcctgaaagagatcgcgatagagaccgggaccggaagtcctccccatct
aaagaccggaagaggcatcgctcacgggataggcgtcgaggaggtagtcgttctcgctct
cggtcccgttccaagtctacagagagggaacgacggcacaaagaacgggaacgagataaa
gaacgggatcggagtaagaaggagcgggagcgggacaaggatggccaccggcgggacaag
gaccgcaagagatccagcttgtctcctggtcgaggaaaagatttcaagtctcggaaggac
agagattctaagaagggtgacgaggatgagcatggtgacaagaggcctaagatccagcca
ctgtccctggaggaacttctggccaagaaaaaggctgaggaagaagctgaagctaagcct
aaattcctctccaaagcagagcgagaggctgaagctctgaagcggcggcagcaggaggtg
gaggagcgacagaagatgctcgaagaagagaggaagaagaggaaacagttccaggatttg
ggcaggaagatgctggaagaccctcaggaaagggaacggagggaacgcagggaaaggatg
gagcgagagaccaatggcaacgaggatgaggagggccggcagaagatccgggaggagaag
gacaagagcaaggagctgcacgctattaaggagcgttacctgggtggcatcaaaaaacgg
cgccggacaaggcatctcaatgaccgcaagtttgtgtttgagtgggatgcgtctgaagac
acctccattgactacaaccccctgtacaaagaacggcaccaggtgcagctgttggggcgg
ggcttcattgcgggcattgacctaaagcagcagaagcgagaacagtcacgtttctatgga
gacctaatggaaaagagacgaaccctggaagaaaaggagcaggaggaagcaagactccgc
aaacttcgtaagaaggaagccaagcaacgctgggatgatcgccactggtcccagaagaag
ttagatgagatgacagacagggactggcggatctttcgggaagactatagcatcaccacc
aaaggtggcaagattcccaatcctattcggtcctggaaagattcgtctctgcccccacat
atcttggaagtcattgataagtgtggctacaaggagccaacacctatccagcgtcaggcc
attcccattgggcttcagaatcgtgacatcattggcgtggctgagactggcagtggcaag
acagcagccttcctcatcccattactggtctggatcaccacacttcccaaaattgacagg
atcgaagagtccgaccagggcccttatgccatcatcctggctcccacccgtgaattggct
cagcagatcgaggaagagaccatcaagttcggaaagccactaggtatccgcactgtggct
gtcattggtggcatctccagagaggaccaaggcttcaggctacgcatgggttgtgagatt
gtgatcgccaccccaggacgtctgattgacgtgctggagaaccgttacctggtgctcagc
cgctgcacctatgtggttctggatgaggccgacaggatgattgacatgggcttcgagcca
gatgtgcagaagatcctggagcacatgcctgtcagcaaccagaagccggacacggacgag
gccgaggaccccgagaagatgttagccaactttgaatcaggaaaacacaagtaccgtcaa
acagtcatgttcacggctaccatgcctccagcggtggagcgtctagccaggagctatctt
cggcggcctgctgtggtgtacattggctctgcaggcaagccccatgagcgggtggaacag
aaggtctttctcatgtcggagtcagaaaagaggaaaaagctgctggcaatcctggaacaa
ggttttgatccacccatcatcatctttgtcaaccagaagaagggttgcgacgtgttggcc
aagtctctggagaagatggggtacaacgcctgtacactgcatggtggcaaaggccaggag
cagcgagaattcgcattgtccaacctcaaggctggagccaaggatattctggtggctaca
gatgtggctggtcgtggtatcgatatccaagacgtatctatggttgtcaactacgacatg
gccaaaaacattgaagattacattcaccgaattggccgcacaggaagagcaggcaagagt
ggtgtagccatcaccttcctcaccaaagaggactcagccgtgttctatgaactgaagcaa
gccatcctggagagcccagtgtcctcttgccctccagagctggcaaaccacccagatgcc
cagcacaagccaggcaccatccttaccaagaagcgcagggaagagaccatctttgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system