KEGG   Rattus norvegicus (rat): 300228
Entry
300228            CDS       T01003                                 
Symbol
Lima1
Name
(RefSeq) LIM domain and actin-binding protein 1
  KO
K23026  LIM domain and actin-binding protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    300228 (Lima1)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     300228 (Lima1)
SSDB
Motif
Pfam: LIM
Other DBs
NCBI-GeneID: 300228
NCBI-ProteinID: NP_001178544
RGD: 1564050
Ensembl: ENSRNOG00000059801
UniProt: F1LR10
Position
7:complement(132780556..132880343)
AA seq 755 aa
MESTPFNRRQWTSLSLRVTAKELSLVNKNKSSTIVEIFSKYQKAAEEANMERKKNNTESL
PQHFRRGTLSVLKKKWENPVAGAESHTDSLPNSSSDGGHTADHPPAEVTAKAAPGARADR
EEHTQPRSRFGSRPEAVTQCRYPRSEDSHDFKAQATESQNMENCLGDSRHEAEKPEMSEN
TETSGKIEKYNVPLNRLKMMFEKGEHSQNKSPWTQGRNAGGRRLSENSCSLDDLEIGAGH
LSSSAFNSEKNESKRNLELPRLSETSIKDRMAKYQAAVSKQSSPASYASELKPSESKTHK
WEQKENVPPGPEACSIHQEGSKVSATENSLVAHPVPAEDDTCNSQGRSEAQQPIYTKPLS
PDARTSSLPESSPSKTAKKFQAPARESCVECQKTVYPMERLLANQQVFHISCFRCSYCNN
KLSLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHKQHKDLWASKGENEETLGRPAQPP
SAGETPHSPGVEDAPIAKVGVLAASMEAKASSQREREENKPAETKKLRIAWPPPAEQGSS
GSAPEEGFKVSKPKWPPEDEVCKTEAPEDVDLDLKKLRRSSSLKERSRPFTVAASFRTSS
VKSPKPLSPSLRKGWSEPEPEQSEEFGGGTVTQTESPRPSREKESVGKSRWQSEEAEAEA
EEAPRGRDGRSFELESESFIGNGASIAEDDVAPAQRSPLEPESPGWPGFGDTTTAKEFNQ
KSQDVGFWEGEVVRELSVEEQIKRNRYYDEDEDEE
NT seq 2268 nt   +upstreamnt  +downstreamnt
atggaatcgactccgtttaatagacggcagtggacttccctgtcactgagagtaacagcc
aaagaactttctctcgtcaacaagaacaagtcgtccacaattgtggaaatattctccaag
taccagaaagcagctgaagaagcaaacatggaaaggaagaaaaataacactgaaagtctc
ccgcagcactttagaagagggaccctgtctgtgttaaagaagaagtgggagaaccccgtg
gcgggagcggaatcccacacagactcactgccaaacagcagcagcgacggtgggcacacg
gcggaccaccctcctgctgaagtgacagccaaggctgctcctggagccagagctgaccgg
gaagagcacacccagcccagatctagatttggatctcgtccggaagctgttactcagtgt
cggtatccccgctcagaggacagccacgattttaaagcccaggccacggaaagccaaaat
atggaaaactgtctgggagattccaggcatgaagcagagaagcccgaaatgagcgaaaac
acggaaacttcaggcaaaatagagaaatacaacgttccactgaacagactaaagatgatg
tttgagaaaggtgaacacagccaaaacaagagtccctggacccagggccgaaatgcaggc
ggaaggaggctctctgaaaacagctgttccctggacgatttggaaataggtgcaggtcat
ttgtcttcctctgccttcaactcggagaaaaatgagagtaagcggaatctggagctgcca
cgcctctctgagacctccataaaggaccgcatggccaagtaccaggctgccgtgtccaag
cagagcagcccagccagctacgcaagtgagctgaaacccagtgaaagcaaaactcacaaa
tgggagcagaaggagaacgtgccccccggccccgaggcctgcagcatccatcaggaaggg
agcaaggtttctgcaactgagaatagcctggtggcccaccctgtccctgcagaagatgac
acctgtaactcccaggggaggagtgaggcccagcagcccatatacactaagccgctgagt
cccgacgccaggacctccagtcttccggaaagttctccttccaaaacagcgaagaagttt
caggcacccgcaagagagagctgcgtggagtgtcagaagacggtgtatcccatggaacgg
ctcctggccaaccagcaggtgtttcacatcagctgtttccgatgctcctactgcaacaac
aaactcagtctaggaacatatgcatccttacacggaagaatctattgtaagcctcacttc
aaccaactcttcaagtccaaaggcaactatgacgaaggctttgggcacaagcagcataag
gatctgtgggcaagcaaaggtgaaaatgaagagactttggggagaccagcccagcctccc
agtgcaggggagaccccccatagcccgggtgtagaagatgcccccatcgccaaggtcggc
gtgctggctgcgagtatggaagccaaggcctcctctcagagggagagggaagagaataag
ccagcggagaccaagaagctgaggatcgcctggcctcccccagccgagcagggcagttca
ggaagtgccccggaggaagggttcaaagtgtcaaagcccaagtggcctcccgaggatgaa
gtctgcaagacagaggcgccggaggatgtagatctggacctgaagaagctgaggcgctct
tcgtccctgaaggagaggagccgcccgtttactgtcgcggcttcctttcgaacctcctcg
gtcaagagccccaagcccttgtcgccgtccctcaggaagggttggagcgagccggagccc
gagcagagtgaggagttcggaggagggacagtgacacaaacggaaagccccaggccctct
cgggagaaggagagtgtgggaaaatcacgctggcagagcgaggaagcggaagcggaagcg
gaggaagcgccgaggggcagggacggtcgttcttttgagctggagagtgagagttttata
ggaaatggcgcaagcatagctgaagacgacgtcgccccagcacagcggtctccattagaa
cccgagtctccgggttggcctggctttggagacaccacgactgctaaagaattcaatcaa
aaatcccaagatgtcgggttctgggagggggaagtggtccgagagctgtccgtggaggag
cagataaagagaaaccggtactatgacgaggatgaggatgaggaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (50)   

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