KEGG   Rattus norvegicus (rat): 300253
Entry
300253            CDS       T01003                                 
Symbol
Eif4b
Name
(RefSeq) eukaryotic translation initiation factor 4B
  KO
K03258  translation initiation factor 4B
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04150  mTOR signaling pathway
rno04151  PI3K-Akt signaling pathway
rno05205  Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    300253 (Eif4b)
   04150 mTOR signaling pathway
    300253 (Eif4b)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    300253 (Eif4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    300253 (Eif4b)
   03012 Translation factors [BR:rno03012]
    300253 (Eif4b)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     300253 (Eif4b)
   mRNA cycle factors
    Stress granule specific factors
     300253 (Eif4b)
Translation factors [BR:rno03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    300253 (Eif4b)
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 300253
NCBI-ProteinID: NP_001008325
RGD: 1306479
Vega: OTTRNOG00000001602
UniProt: Q5RKG9
Position
7:135085259..135107054
AA seq 611 aa
MAASAKKKNKKGKTISLTDFLAEDGGTGGGSTYVPKPVSWADETDDLEGDVSTTWHSNDD
DVYRAPPIDRSILPTAPRAAREPNIDRSRLPKSPPYTAFLGNLPYDVTEDSIKDFFRGLN
ISAVRLPREPSNPDRLKGFGYAEFEDLDSLLSALSLNEESLGNRRIRVDVADQAQDKDRD
DRSFGRDRNRDSDKTDTDWRARPATDSFDDYPPRRGDDSFGDKYRDRYESDRYRDGYRDG
YRDGPRRDMDRYGGRDRYDDRGSRDYDRGYDSRIGSGRRAFGSGYRRDDDYRGGGDRYED
RYDRRDDRSWSSRDDYSRDDYRRDDRGPPQRPKLNLKPRSTPKEDDSSASTSQSSRAASI
FGGAKPVDTAAREREVEERLQKEQEKLQRQLDEPKLDRRPRERHPSWRSEETQERERSRT
GSESSQTGTSATSGRNTRRRESEKSLENETLNKEEDCHSPTSKPPKPDQPLKVMPAPPPK
ENAWVKRSSNPPARSQSSDTEQPSPTSGGGKVAPAQPSEEGPSRKDETKVDGVSTTKGQT
GHSSRGPGDGGSRDHWKELDRKDGKKDQDSRSAPEPKKSEENRASKFSSASKYAALSVDG
EDEDEGDDCTE
NT seq 1836 nt   +upstreamnt  +downstreamnt
atggcggcctcagcaaaaaagaagaataagaaggggaagaccatctccctaacagacttt
ctagctgaggatgggggaactggtggaggaagcacctatgtccccaaaccagtcagctgg
gctgatgaaacagacgatctggaaggagatgtgtcaacaacttggcatagtaacgatgac
gatgtgtacagggcacctcctattgaccgttccatccttcccactgctccacgggctgct
cgggaacccaatattgatcggagccgtcttcccaagtcaccaccctacactgctttccta
gggaatctgccctatgatgtgacagaagactctattaaggatttctttagaggattaaat
atcagcgctgtacgcttgccgcgtgagcccagcaatccagacaggttgaaaggttttggc
tatgccgaatttgaggatctggattctctgctcagtgctctgagtctcaatgaagagtct
ctaggtaacaggagaattcgggtggatgttgctgatcaagcacaggataaagacagggat
gaccgttcttttggtcgagatagaaatcgggattctgacaagacagacacagactggagg
gcccgtcctgccacagacagctttgatgactacccacctagacgaggtgatgacagcttc
ggagacaagtatcgagatcgttacgagtcagaccggtatcgggatgggtatagggacgga
tatcgggacggcccacgcagagacatggaccgctatgggggccgggatcgctatgatgac
cgaggcagcagagactatgaccgaggctatgactccaggataggcagtggcagaagagca
tttggaagtgggtaccggagggatgacgactacagaggaggtggggaccgctatgaagat
cgctatgacagacgggacgatcggtcatggagctccagggacgattactctcgggacgat
tacaggcgtgatgacagaggtcccccccaaagacccaaactgaatctaaagcctcggagt
actcctaaagaagatgattcctctgctagcacctcccagtccagccgagcggcttctatc
tttggaggggcgaagcctgttgacacagctgctagagaaagagaagtagaggagcggcta
cagaaggagcaggagaagctgcagcgtcagctggatgagccaaaactagaccgccggccc
cgggagagacacccaagttggcgaagtgaagaaactcaggaaagagaacggtcgaggaca
ggaagtgagtcatcgcagactgggacctcagccacatctggcagaaatacacgaaggaga
gagagtgagaagtctctagaaaatgaaaccctcaataaagaagaagactgtcactctcca
acctctaagcctcctaaacctgaccagcctctaaaggtaatgccagcccctccaccaaag
gagaatgcgtgggtgaagcgaagctctaaccctcctgctcgatctcagagctcagacaca
gagcagccgtcccctacaagtggtggagggaaagttgctccagctcagccctctgaggaa
ggaccatcaaggaaagatgaaactaaagtggatggggtgagcaccaccaaaggccagact
ggacactccagccgtggtcctggggatggagggagcagagaccactggaaggagttggat
aggaaggacggcaaaaaagatcaagactccagatctgcacctgagccaaagaaatctgag
gagaaccgagcctctaagttcagttctgcaagcaagtacgctgctctgtctgtggacggt
gaggatgaggatgagggagacgactgcactgagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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