KEGG   Rattus norvegicus (rat): 300652
Entry
300652            CDS       T01003                                 
Symbol
Sorl1
Name
(RefSeq) sortilin-related receptor precursor
  KO
K24498  sortilin-related receptor
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    300652 (Sorl1)
Membrane trafficking [BR:rno04131]
 Endosome - Golgi transport
  Others
   Others
    300652 (Sorl1)
SSDB
Motif
Pfam: Ldl_recept_a Sortilin-Vps10 Sortilin_C fn3 Ldl_recept_b Pur_ac_phosph_N Interfer-bind BNR_6
Other DBs
NCBI-GeneID: 300652
NCBI-ProteinID: NP_445971
RGD: 619914
Ensembl: ENSRNOG00000064634
UniProt: P0DSP1
Position
8:complement(51238713..51401458)
AA seq 2215 aa
MATRSSRRESRLPFLFTLVALLPPGALGGGWTQRLHGGGAPLPQDRGFFVVQGDPHELRL
GTHGDAWGASPAARKPLRTRRSAALQPQPIQVYGQVSLNDSHNQMVVHWAGEKSNVIVAL
ARDSLALTRPKSSDVYVSYDYGKSFNKISEKLNFGVGNSSEAVISQFYHSPADNKRYIFV
DAYARYLWITFDFGSTIHGFSIPFRAADLLLHSKASNLLLGFDSSHPNKQLWKSDDFGQT
WIMIQEHVKSFSWGIDPYDQPNTIYIERHEPFGFSTVFRSTDFFQSRENQEVILEEVRDF
QLRDKYLFATKVVHLPGSQQQSSVQLWVSFGRKPMRAAQFVTKHPINEYYIADASEDQVF
VCVSHSNNSTNLYISEAEGLKFSLSLENVLYYSPGGAGSDTLVRYFANEPFADFHRVEGL
QGVYIATLINGSMSEENMRSVITFDKGGTWEFLQAPAFTGYGEKINCELSQGCSLHLAQR
LSQLLNLQLRRMPILSKESAPGLIIATGSVGKNLASKTNVYISSSAGARWREALPGPHYY
TWGDHGGIIMAIAQGMETNELKYSTNEGETWKTFVFSEKPVFVYGLLTEPGEKSTVFTIF
GSNKESVHSWLILQVNATDALGVPCTENDYKLWSPSDERGNECLLGHKTVFKRRTPHATC
FNGEDFDRPVVVSNCSCTREDYECDFGFKMSEDISLEVCVPDPEFSGKPYSPPVPCPVGS
SYRRTRGYRKISGDTCSGGDVEARLEGELVPCPLAEENEFILYAMRKSIYRYDLASGATE
QLPLSGLRAAVALDFDYEHNCLYWSDLALDTIQRLCLNGSTGQEVIINSGLETVEALAFE
PLSQLLYWVDAGFKKIEVANPDGDFRLTIVNSSVLDRPRALVLVPQEGVMFWTDWGDLKP
GIYRSNMDGSAAYRLVSEDVKWPNGISVDGHWIYWTDAYLDCIERITFSGQQRSVILDNL
PHPYAIAVFKNEIYWDDWSQLSIFRASKYSRSQVETLASQLTGLMDMKIFYKGKNAGSNA
CIPQPCSLLCLPKANNSKSCRCPEGVASSVLPSGYLMCDCPQGYERKNNTCVKEENTCLR
NQYHCSNGNCINSIWWCDFDNDCGDMSDERNCPTTICDADTQFRCQESGTCIPLSYKCDL
EDDCGDNSDESHCEMHQCRSDEFNCSSGMCIRSSWVCDGDNDCRDWSDEANCTAIYHTCE
ASNFQCHNGHCIPQRWACDGDADCQDGSDEDPISCEKKCNGFHCPNGTCIPSSKHCDGLR
DCPDGSDEQHCEPFCTRFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDATFAGCSQDPE
FHKECDEFGFQCQNGVCISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFHCENGR
CIPNRWKCDRENDCGDWSDEKDCGDSHIFPSPTPGPSTCLPNYFRCSSGACVMGTWVCDG
YRDCADGSDEEACPSLANSTAASTPTQLGQCDRFEFECRQPKKCIPNWKRCDGHQDCQDG
QDEANCPTHSTLTCMSREFKCEDGEACIVLSERCDGFLDCSDESDEKACSDELTVYKVQN
LQWIADFSGDVTLTWTRPKKMPSASCVYNVYYRVVGESIWKTLETHSNKTSTVLKVLKPD
TTYQVKVQVHCLSKVHNTNDFVTLRTPEGLPDAPRNLQLSLNSEEEGVILGHWAPPVHTH
GLIREYIVEYSRSGSKMWASQRAASNSTEIKNLLLNALYTVRVAAVTSRGIGNWSDSKSI
TTTKGKVIQAPNIHIDSYDENSLSFTLTMDGDIKVNGYVVNLFWSFDAHKQEKKTLNFRG
GSSLSHKVSNLTAHTSYEVSAWAKTDLGDSPLAFEHILTRGISPPAPSLKAKAINQTAVE
CIWTGPKNVVYGIFYATSFLDLYRNPKSLTTSLHNKTVIVSKDEQYLFLVRVLIPYQGPS
SDYVVVKMIPDSRLPPRHLHAVQIGKTSAVIKWESPYDSPDQDLFYAIAVKDLIRKTDRS
YKVRSRNSTVEYSLSKLEPGGKYHIIVQLGNMSKDSSIKITTVSLSAPDALKIITENDHV
LLFWKSLALKEKQFNETRGYEIHMFDSAVNLTAYLGNTTDNFFKVSNLKMGHNYTFTVQA
RCLFGSQICGEPAVLLYDELSSGGDATVVQTARSTDVAAVVVPILFLILLSLGVGFAVLY
TKHRRLQSSFTAFANSHYSSRLGSAIFSSGDDLGEDDEDAPMITGFSDDVPMVIA
NT seq 6648 nt   +upstreamnt  +downstreamnt
atggcgacacggagcagcaggagggagtcgagactccctttcctattcaccctggtcgct
ctgctgccccccggggctctcggcgggggctggacgcagagattgcatggtggcggagcg
cccttgccccaggaccgcggcttcttcgtggtgcagggcgacccgcacgagctgcggctg
ggaacgcacggggatgcctggggggcgagcccagcggccaggaagccactcaggacgcgg
cggagcgctgctttgcagccccagcctatccaggtgtatggacaggtcagcctgaatgac
tcccacaatcagatggtggtgcactgggctggagagaaaagcaacgtgatcgtggcatta
gcccgagacagcctggcattgacaaggcccaagagcagtgatgtatatgtgtcttatgac
tatggaaaatcattcaataagatttcagagaagctgaactttggtgtgggaaacagcagt
gaagccgtgatctcccaattctaccacagccctgccgacaacaagaggtacatctttgtg
gatgcttatgcccgatacctctggatcacgtttgacttcggcagcacgatccatggcttc
tccatcccattccgggcggctgatctcctccttcatagcaaggcctccaacctcctcttg
ggctttgacagctctcaccccaacaagcagctatggaagtcggatgattttggccagacc
tggatcatgattcaggaacatgtgaagtccttttcttgggggatcgacccctatgaccag
ccgaacactatctacatcgagcggcatgaaccctttgggttctccacagtgttccgcagc
acagacttcttccagtcccgggaaaaccaggaagtgatcctggaggaagtgagagacttt
cagcttcgggacaagtacctgtttgctacaaaggtggtgcatcttccgggcagccagcag
cagtcatctgtccagctctgggtctcctttggccggaagcctatgcgagcagcccagttt
gtcacaaagcatcctattaacgaatactacatcgccgatgcctccgaagaccaggtcttc
gtgtgcgtcagccacagcaacaatagtactaacctgtacatctcagaggcggaggggctg
aaattctccctatccttggagaatgtgctgtattatagcccaggaggggccggcagtgac
accctggtgaggtattttgcaaacgagccgtttgccgactttcaccgagtggagggctta
caaggagtctacattgccaccctgattaatggatctatgagtgaggagaacatgaggtcg
gtcatcacctttgacaaagggggaacctgggaatttcttcaggccccggccttcacagga
tatggagagaaaatcaattgtgagctctctcagggctgctccctccacctggcccagcgc
ctcagtcaactgctcaacctccaacttcggaggatgccgatcctgtccaaggagtcagcc
cccggcctcatcatcgccaccggctctgtgggaaagaacttggccagcaagaccaacgtg
tacatctctagcagtgccggagcccggtggagagaggctcttccaggacctcattactat
acttggggtgaccatggaggcatcatcatggccattgcccagggcatggagaccaacgag
ctgaagtacagcaccaatgaaggcgagacctggaagacgttcgtcttctctgagaagcct
gtgtttgtgtatgggcttctcacggaacctggcgagaagagcaccgtcttcaccatcttc
ggctctaacaaggagagtgtccacagctggctcatcctgcaggtcaatgccaccgacgcc
ttgggggttccttgcacggaaaacgactacaagctgtggtccccatctgatgagcggggg
aacgagtgtttgctaggacacaagacagttttcaaaaggaggacccctcacgcaacgtgc
tttaatggggaagactttgaccggccggtggtcgtgtccaactgctcctgcacccgggag
gactacgaatgtgactttggcttcaagatgagtgaagatatctccttagaggtttgtgtt
ccagaccctgagttttctgggaagccctacagccctcctgtgccttgtcccgtgggttct
tcctacaggagaacaagaggctatcggaagatttctggggatacgtgcagtggaggagat
gttgaggcacggctggagggggagctggtcccctgtcccctggcagaagagaatgagttc
atcctgtacgccatgcggaaatccatctaccgctacgacttggcctcgggagccacggaa
cagcttcctctctcggggctgcgggcagccgtggccctggactttgactatgagcacaac
tgcctgtattggtctgacctggcgctggacaccatccagcgtctctgcttgaatgggagc
acagggcaagaggtgatcatcaattctggcctggagaccgtggaggctttggcctttgaa
cccctcagccagttactttactgggtggatgccggctttaaaaagatcgaggtagctaat
ccagatggtgacttccggctgacaatcgtcaattcctctgtgcttgatcgacccagggct
ctagtccttgtgccccaagagggggtgatgttctggactgactggggagacttgaagcct
ggaatttaccggagcaacatggatgggtctgctgcctatcgccttgtgtcagaggacgtg
aagtggcctaatggcatctctgtggacggccactggatttactggacggacgcttacctg
gactgtatcgagcgcatcactttcagtggccagcagcgttcagtcatccttgacaacctc
ccacacccttacgccattgccgtctttaagaacgagatctactgggacgactggtcgcag
ctcagtatcttcagagcttccaagtacagcaggtcccaggtggagaccctagcgagccag
ctcaccggcctgatggacatgaagatcttctacaaaggaaagaacgccggaagcaatgcc
tgcattcctcagccctgcagtctactgtgcctccctaaggccaacaacagcaaaagctgc
aggtgtccagaaggcgtggccagcagtgtcctcccctctgggtacctgatgtgtgactgc
cctcagggctacgagaggaagaacaacacctgtgtcaaagaagagaacacctgtcttcgc
aaccagtaccactgcagcaacggcaactgtatcaacagcatttggtggtgtgatttcgac
aacgactgtggcgatatgagtgacgagaggaattgccccacgaccatctgtgatgcagac
actcagttccggtgccaggagtcggggacttgtattccactctcctataagtgtgacctt
gaagatgactgtggagataacagtgatgagagtcactgtgagatgcaccagtgtcgcagc
gacgagttcaactgtagctctgggatgtgcatccggtcctcctgggtgtgcgacggagac
aacgactgtcgggactggtctgatgaagccaactgcaccgccatctaccacacctgtgag
gcctccaacttccaatgccacaatggccactgcatcccccagcgatgggcatgtgacggt
gacgcggattgccaggacggctctgatgaagatcccatcagctgtgagaaaaagtgcaat
ggattccactgcccaaacggcacgtgcatcccatccagcaagcattgtgacgggctgcgg
gactgccccgacggctctgacgagcagcactgtgagcccttctgcacacgtttcatggac
tttgtgtgtaagaaccgtcagcagtgtctgttccactccatggtgtgtgacgggatcatc
cagtgccgagatggctctgatgaggatgccaccttcgccggatgctcccaagacccggag
ttccacaaggagtgtgacgagttcggcttccagtgtcagaacggagtgtgcatcagcttg
atttggaaatgcgatgggatggatgactgcggagactactctgacgaggccaactgtgaa
aaccccacagaagccccgaactgctcccgctacttccagttccactgtgagaatggccgc
tgcatccccaacaggtggaaatgtgacagagagaatgactgcggggactggtctgatgag
aaggactgtggagattcacacattttcccctcccccacccccggaccgtccacatgtctg
cccaattacttccgatgcagcagcggggcctgcgtgatgggcacctgggtgtgcgacggc
tacagggactgtgctgatggctcagatgaggaagcctgcccctctctagcaaactccact
gccgcctccactcccacccagcttgggcagtgtgaccgatttgagttcgagtgccgccaa
ccaaagaaatgtatccccaactggaagcgctgtgatggccaccaggattgccaagacggc
caggacgaagccaactgccccactcacagcaccttgacgtgtatgagcagggagttcaag
tgtgaggacggcgaggcgtgcattgtgctctcggagcgctgtgacggcttcctggattgc
tctgatgagagtgatgagaaggcctgcagcgatgagttaacagtatataaagtccagaat
cttcaatggatagctgatttctctggggatgtgactttgacctggacgcgaccaaaaaaa
atgccatctgcttcttgtgtatacaatgtgtactacagggtggttggagagagcatatgg
aagaccctggaaacccatagcaataaaacaagcactgtgctgaaggtcctgaagccagac
accacgtaccaggttaaggtccaggtgcactgccttagcaaggtgcacaacaccaatgac
tttgtgaccctgaggactccagaggggttgccggatgcccctcggaatctccagctctcc
ctaaacagtgaagaggaaggtgtgattcttgggcactgggctcctcccgtccacacccat
ggcctcatccgtgagtacattgtggaatacagccggagtggatccaagatgtgggcctcc
cagagagctgccagcaactctacagagataaagaacttactgctcaatgccctctacacc
gtccgagtggctgcggtgactagtcggggaataggaaactggagtgattccaaatccatc
accaccacaaaaggaaaagtgatccaagcaccaaatatccacattgacagctacgatgaa
aattctctcagctttaccctgaccatggacggtgacatcaaggtcaatggctatgtggtg
aaccttttctggtcatttgatgcccacaaacaagaaaagaaaaccttgaacttccgagga
ggaagctcgctgtcacacaaagtgagcaatctgacagctcatacgtcctatgaggtttct
gcctgggccaagacagacttgggggacagtcctctggcctttgagcacatcttgaccaga
ggcatcagtccacctgctcctagtctcaaagccaaggccatcaatcagactgcagtggag
tgcatctggactggccccaagaatgtggtgtatggtattttctacgccacatccttcctc
gacctctaccgaaaccctaagagtttaactacttcactccacaataagacagtcattgtc
agcaaggatgagcagtatttgtttctggtccgggtgttgatcccttaccaagggccgtcc
tccgactacgttgtggtgaagatgatcccagacagcaggcttccacctcggcacctacat
gccgtccaaataggcaagacctcagcagtcatcaagtgggagtcaccctacgactctcct
gaccaggacctgttctacgccattgcagtgaaagatctgatccgaaagacggacaggagc
tacaaagtcagatcccgcaacagtactgtggagtacagccttagcaagctggagcctgga
gggaaataccatatcattgtccagctgggaaacatgagcaaggactccagcataaaaatc
accaccgtctcattgtcagcacctgatgccttaaaaatcataaccgaaaacgaccacgtt
ctcctcttttggaaaagtctagctttaaaggaaaagcagttcaatgaaaccaggggctac
gagatacacatgtttgacagtgccgtgaatctcaccgcttaccttgggaatactactgac
aatttctttaaagtgtccaacctgaagatgggtcacaattacactttcacggtccaggct
cgatgtctctttggtagccagatctgcggggagcctgccgtgctgctgtatgacgaactg
agctcaggtggagatgccacagtggtccagactgccaggtctactgacgtcgcggccgtg
gtggttcctatcttgttcctgatcctgctgagcctgggagtcggctttgccgtcctctac
acgaagcaccgccgcttacaaagcagcttcactgcctttgccaacagccactacagctcc
aggctgggctccgccatcttctcttccggggatgacctaggagaggacgacgaagatgct
cccatgattaccggattctcagacgatgtccccatggtgatagcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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