KEGG   Rattus norvegicus (rat): 300710
Entry
300710            CDS       T01003                                 
Symbol
Ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
  KO
K14776  ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    300710 (Ddx10)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     300710 (Ddx10)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  90S particles
   Helicases
    300710 (Ddx10)
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII PAS_11
Other DBs
NCBI-GeneID: 300710
NCBI-ProteinID: NP_001100290
RGD: 1308990
Ensembl: ENSRNOG00000012500
UniProt: A6J4I8 D3ZBY5
Position
8:complement(62384876..62539585)
AA seq 874 aa
MGKTVGSLGQGTRPDPVRSFNRWKKKHSHRQHQKKERRKQLKKPEWQVEREGISRLMQNY
EKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKT
LAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKD
LKHEAERINNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAII
ENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIICELHQK
ISVLFSFLRSHLTKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNE
FVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILL
PSEEQGMVQQLLQKKVPVKEIKINPEKLIDVQKRLESFLAQDQDLKERAQRCFVSYIRSV
YLMKDKEVFDVNKLPITEYALSLGLAVAPRIRFLQKMEKQPNKELGKNQVTEAIQPRAPS
LTSDEVEEFRAYFSEKMSILHKSGKRLEETEHSLASGESEEQDEETEDEEMEDHVGQTRE
PPTDSVPRSEEAQKVKEVPVQFLDRDDDEEDGPDADFLTVKRRDVFGLDLKENEALSKKE
PSKSSVKKKLTKVAEAKKVMKRNFKVNKKITFTDEGELVQQWPQIQKCATNDVEEEDDTG
GINLDKAKERLQEEDKFDKEEYRKKIKAKHRERRLKEREARREANKRQAKARDEEEAFLD
WSDEDDGGFDPSTLPDPDKHRSSEESESEDTKHKMSDTKKKQEMRKRNNTEVDDVRPRSR
HGKKAKWETLEPLDTGLSLAEDEELVLHLLKSQN
NT seq 2625 nt   +upstreamnt  +downstreamnt
atgggcaaaacggttggttctctgggtcagggaacccgaccggacccggtgaggagcttc
aaccgctggaagaaaaaacacagccacaggcagcaccaaaagaaggaacggaggaagcag
cttaagaagccggaatggcaggtcgaacgtgagggtatcagccgcctcatgcaaaattac
gagaagataaatgtaaatgaaattacaagattttcagatttccctttatccaaaaaaacg
ttgaaaggtttgcaagaagcgcaataccgcttggtaacagagatacagaagcagaccata
gggttggctttgcaaggtaaagatgtgcttggagctgccaaaactgggtctggcaagact
ttggcttttctcgttccagtattggaagccttataccgcctgcagtggacttcaacagac
ggcctgggagttctgataatatcacctactcgagaactggcctatcagacatttgaggtt
ctacgcaaagtaggaaagaaccatgatttttcagctggtctcatcattggtgggaaggat
ctaaaacatgaagctgagaggatcaacaacataaatatactcgtttgcacaccaggtcga
cttcttcaacacatggatgaaacaatctgttttcatgccaccaatcttcagatgttagtt
cttgatgaggcagacagaatcttagatatgggctttgctgataccatgaatgctatcatt
gaaaatcttcccaagaaacgccagactttgctgttctcagctacacagaccaaatctgtg
aaggaccttgcgcgcttgagtttgaaagaccctgagtatgtctgggttcatgagaaagca
aaatatagcacccctgctacattggaacagaactatataatttgtgagctgcaccaaaaa
ataagtgtgctgttttcatttttgagaagccacctaacgaagaagagtattgtgtttttc
tccagttgcaaagaggtgcagtatctgtacagggtgttctgccggctgcgcccagggatc
tctatccttgctctccatggccggcagcagcagatgcgaagaatggaagtctacaatgaa
tttgtccgaaagagggctgcagtcctttttgctactgatattgcagccaggggattggat
tttccagctgtgaattgggtccttcagtttgattgtccagaggatgccaacacgtatatt
cacagagctggtagaactgccaggtacaaggaggacggagaagcgttattaattttactg
ccctccgaagaacaaggcatggtgcagcagcttctccagaagaaagttcctgtgaaggag
atcaaaatcaatccagaaaaacttatcgatgttcagaaaagattagaatcatttttagct
caagatcaagatttaaaagaaagagctcaaaggtgttttgtctcctacatacgttcagta
tatcttatgaaggataaagaagtatttgatgtgaacaagttacctattactgaatatgca
ctgtctcttggtcttgctgtggcaccacggataagatttcttcagaaaatggagaaacag
cccaacaaagaattgggaaagaatcaagtcactgaagcaattcagcccagggctccctcc
ctcaccagtgatgaagtagaagaatttcgagcttatttcagtgagaaaatgtccatcctt
cacaaaagtgggaaaagactagaagagacagaacacagcttggctagtggtgagagtgaa
gaacaggatgaagagacggaagatgaagaaatggaagatcatgtgggacaaacaagagag
cctcccactgactctgttcccaggagtgaggaggcacagaaggtcaaggaagttcctgtg
cagttcttagacagggatgatgatgaggaagatgggcctgatgctgacttcctcacagtg
aagcggcgtgatgtgtttgggttggatcttaaagagaatgaagcactgtcgaaaaaggaa
ccttctaaatccagtgtcaagaaaaaattaaccaaagttgcagaagcaaaaaaagtaatg
aagagaaattttaaagtgaacaagaaaataacatttacggatgaaggagagttggttcag
cagtggccacagattcagaaatgtgctacaaatgatgtggaggaagaagatgacactggt
ggcatcaacctagacaaagccaaagaaaggcttcaggaagaggacaaatttgacaaagaa
gaatataggaagaaaattaaggcaaagcatcgggaaagacgcttaaaagagagagaggcc
agaagagaagccaacaaaagacaagcaaaggccagagatgaagaggaagcctttctggac
tggagtgatgaagatgatggtggatttgatccaagcacacttccagatccagataagcac
agaagttctgaagaatcagagagtgaagatacaaaacacaagatgagtgacaccaagaag
aagcaggaaatgaggaagagaaacaacactgaagtcgatgatgtaagaccaagaagtcgt
catggaaagaaggccaagtgggaaacgttagaacctttggatacaggcctgtctttagca
gaggacgaagagctggtgttacatctcctcaaaagtcaaaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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