KEGG   Rattus norvegicus (rat): 300786
Entry
300786            CDS       T01003                                 
Symbol
Clpx
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial precursor
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:rno03110]
    300786 (Clpx)
Chaperones and folding catalysts [BR:rno03110]
 Heat shock proteins
  HSP100
   300786 (Clpx)
SSDB
Motif
Pfam: AAA_2 AAA ClpB_D2-small AAA_5 Mg_chelatase AAA_7 Sigma54_activat AAA_22 AAA_14 AAA_16 Sigma54_activ_2 IstB_IS21 RuvB_N T2SSE NACHT nSTAND3 TsaE DEAD AAA_18 ABC_tran MCM AAA_24 PduV-EutP TIP49 ResIII AAA_29
Other DBs
NCBI-GeneID: 300786
NCBI-ProteinID: NP_001007804
RGD: 1304883
Ensembl: ENSRNOG00000030225
UniProt: Q5U2U0 A6J5E7
Position
8:74700602..74740244
AA seq 633 aa
MSSCGACTCGAAAARLLTTSLTSAQRGISCGRIHVPVLGRLGTLDTQILRRAPLRTFSET
PAYFASKDGTNKDGSGDGNKKSVTEGSSKKSGSGNSGKGGNQLRCPKCGDLCTHVETFVS
STRFVKCEKCHHFFVVLSEADSKKSIIKEPESAAEAVKLAFQQKPPPPPKKIYNYLDKYV
VGQSFAKKVLSVAVYNHYKRIYNNIPANLRQQAEVEKQTSLTPRELEIRRREDEYRFTKL
LQIAGISPHGNALGASMQQQGSQQMPQEKRGGEVLDSPHDDIKLEKSNILLLGPTGSGKT
LLAQTLAKCLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANYNVEKAQQGIVFLDEV
DKIGSVPGIHQLRDVGGEGVQQGLLKLLEGTIVNVPEKNSRKLRGETVQVDTTNILFVAS
GAFNGLDRIISRRKNEKYLGFGTPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLR
HVEARDLIEFGMIPEFVGRLPVVVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCEL
NVTEDALKAIARLALERKTGARGLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEP
GYIRAPSKESSEEDYDSGVEEDGWPRQADAANS
NT seq 1902 nt   +upstreamnt  +downstreamnt
atgtccagttgcggcgcttgtacctgcggcgctgcggctgcccggcttctcaccacctcg
ctcacctccgcgcagagaggtatttcttgtgggcgcattcatgtgccagttttaggaaga
ctggggaccttggacactcagattctgcgcagagctcctcttagaaccttttcagaaaca
ccagcatactttgcctcaaaagatgggacaaacaaggatggctccggagatggaaataag
aaatcagtgactgaaggaagcagcaaaaaatcaggctctgggaattccgggaaaggtgga
aaccagcttcgctgtcctaaatgtggcgacttgtgcacacacgtagagacctttgtgtct
tccacgcgttttgttaagtgtgaaaaatgtcatcattttttcgttgtgctgtcggaagcg
gactcaaagaaaagcataattaaagaaccagagtcagccgcagaggccgtgaagttggca
ttccagcagaaaccacctccacccccaaaaaagatctataactacctcgacaagtatgtg
gttggccagtcgtttgctaagaaagtgctttcagttgccgtgtataatcattataagaga
atatataataatattccagctaatctgagacagcaagcagaggttgagaagcagacatca
ttaacacctagagagttagaaataagaagacgggaggatgagtacagatttacaaagttg
cttcagattgctggaattagcccacatggcaatgccttgggagcatctatgcagcagcag
ggaagtcagcaaatgcctcaggaaaaacgaggaggcgaagtactagattctcctcacgat
gatataaaacttgaaaaaagtaatattctgctgcttggaccaactggatcaggtaaaacc
ctgctggcacaaactttagctaaatgccttgatgttccttttgctatctgtgactgtaca
actttgactcaggctggatatgtaggtgaagatattgaatctgtgattgccaaactactc
caggatgccaattacaatgtggagaaagcacaacaaggaattgtctttctggatgaagta
gataagattggcagtgtaccaggcattcatcagttacgggatgtaggtggagaaggcgtt
cagcaaggtttactgaaacttctagaaggcacaatagtcaatgttccagaaaagaattct
cgaaagctacgtggagagacagttcaagtcgatacaacaaatatcttgtttgtggcatct
ggtgccttcaatggcttagacagaatcatcagtaggaggaaaaatgaaaagtatcttgga
tttggaacaccatctaacctggggaagggcagaagggctgcagctgctgccgatcttgct
aatcgaagtggagaatccaacactcatcaggacattgaagagaaagatcggttactccgc
catgtggaagccagagatcttattgagtttggcatgataccggagtttgtgggacggctg
cctgttgtggttcctttgcacagcctagatgaaaagacgcttgtgcagatactgactgag
ccacggaatgctgtgattcctcaatatcaggccttattcagcatggataagtgtgaattg
aatgttactgaggatgctttgaaagccatagctagattggcactggaaagaaaaacaggt
gcacgaggtcttcggtcgataatggaaaagctgttactagaaccaatgtttgaagttcct
aattctgacattgtatgtgtggaggttgacaaagaagtagtagaaggcaaaaaggaacca
ggatacattcgggctccatcgaaagagtcctcggaagaggactatgactctggagtggag
gaggacggatggcctcgccaagccgatgctgcaaatagctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (26)   
   Pfam (26)   
All databases (46)   

Download RDF
DBGET integrated database retrieval system