KEGG   Rattus norvegicus (rat): 300813
Entry
300813            CDS       T01003                                 
Symbol
Rnf111
Name
(RefSeq) E3 ubiquitin-protein ligase Arkadia
  KO
K10635  E3 ubiquitin-protein ligase Arkadia [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    300813 (Rnf111)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     300813 (Rnf111)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    300813 (Rnf111)
SSDB
Motif
Pfam: RNF111_N zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-rbx1 zf-C3HC4_3 zf-RING_5 zf-RING_UBOX zf-RING_4
Other DBs
NCBI-GeneID: 300813
NCBI-ProteinID: NP_001100306
RGD: 1310097
Ensembl: ENSRNOG00000060750
UniProt: A6KET4
Position
8:complement(79984831..80061022)
AA seq 987 aa
MTQWTPEYNELYTLKVAMKSGTPPDAPTTQESLKAVLLHPQPLGATKSFPAEVEMINSKV
GNEFSHLCDDSQKQEKDMNDNQQEQEKSGVVRKKRKSQQAGPSYVQNCVKENQEILGLRQ
HLATPSDEDDDSSFSECLSSPSSSLHFGDSDTVTSDEDKEVSVRHSQPILSAKSRSHNAR
SHKWPRTEAEPVPGLLMKRPCFHGSAVRRVPCRKRPVKSSSSQRTQKQKERLLVQRKKLA
QRKYALLASSSTSSENDLSSDSSSSSSTDGEEDLCASASENPSNPAAPSGSIDEDVVVIE
ASFTPQVTANEEINVTSTDSEVEIVTVGESYRSRSTLGHSRSHWSQGSSSHTGRAQEPRN
RSRISTVIQPLRQNAAEVVDLTVDEDEPTVVPTTSARMDSQTTSASINNSNPSTSEQGSD
TTSTVASSQPSTVSETAATLTSNSATGSSVGDDVRRTASNAVPESGPPAMPRLPSCCPQH
SPCGGTSQSHHALAHPHSSCFQQHGHHFQHHHHHHHTPHPAVPVSPSFSDPACPVERPQV
QAPCGANSSSGSSYHDQQALPVDLSNSALRTHGSGGFHGASAFDPCCPVSSSRAAVFGHQ
AAAAPTQPLSIDGYGSSMVAQPQPQPPPQPSLSSCRHYMPPPYASLTRALHHQASACHHS
HGSAPPQTQPPPQVDYVIPHPVHAFHSQISTHAASHPVAPPPPTHLGSTAAPIPQHLPPA
HQPISHHIPAPAPSAQRLHPHEVMQRMEVQRRRLMQHPTRAHERPPPHPHRMHPNYGHGH
HIHVPQTMSSHPRQAPERTAWELGIEAGVTAATYTPGALHPHLAHYHAPPRLHHLQLGAL
PLMVPDMAGYPHIRYISSGLDGTSFRGPFRGNFEELIHLEERLGNVNRGASQGTIERCTY
PHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRRLPCMHLFHQV
CVDQWLITNKKCPICRVDIEAQLPSES
NT seq 2964 nt   +upstreamnt  +downstreamnt
atgactcaatggactcctgaatataacgagctctacaccctgaaagtggctatgaagagt
gggactcctcctgatgcgcccactacacaggagagtctgaaggcggttcttctgcaccca
cagcccctaggggccactaagagcttccctgcagaagtggagatgatcaatagcaaagtg
gggaatgaattctctcatctgtgtgatgattcccaaaaacaagaaaaggatatgaatgac
aaccagcaagaacaagaaaaaagtggtgttgtgagaaaaaagcgcaaaagccagcaggct
ggcccctcatatgtgcagaattgtgtcaaagaaaatcaggagatcctcgggttgaggcaa
cacctagcgacaccaagtgatgaagatgacgactcttccttcagcgagtgtctgtcttct
ccctcatctagtctccattttggggactctgatactgtgacttcagatgaggataaagaa
gtctcagtgagacattcccagcctattctgagtgctaaaagcagaagtcacaatgcaagg
tcccacaagtggcctcgaactgaggcagagcctgtgccaggtttgttgatgaaaagacct
tgttttcatggcagtgcagtgaggagagtcccatgtagaaagaggccagtgaagagcagc
tcctcacagaggacacagaagcagaaggagaggctgctagtgcagaggaagaagctggct
cagaggaagtacgctcttctcgccagctccagtacctccagtgagaatgacctcagcagt
gattcctcttccagttcctccacagatggagaagaggacctgtgtgcatctgccagtgag
aaccccagcaaccccgctgctccctcaggaagtattgatgaagatgttgtggtgatagaa
gcttccttcactccccaggtcactgccaatgaagaaattaatgttacctcaactgacagt
gaagtggagattgttacagttggagaaagctatcggtctcgttcaacccttgggcactcc
agatctcattggagccaaggttcaagttcacacacaggccgggcacaggagcctcgaaac
cgcagtaggatctctactgtaatacagcccctgaggcagaacgcagcagaagttgtggac
cttactgttgatgaagatgaacctactgtagtaccaaccacttctgctagaatggactca
caaactactagtgcttccattaacaattcaaatccatctacctctgagcaaggctctgat
actacttcaactgtggccagtagccagccttccacagtgtcagagactgcagctactctt
acaagcaatagtgcaactggttcttctgtgggcgatgacgtgaggagaactgcatcaaat
gctgtcccagaaagtggtcctcctgcaatgccaaggctaccttcatgctgcccccagcac
tcaccatgcggagggacatcacagagtcaccatgcattagcacatccacactcaagttgt
tttcagcagcatggccaccattttcagcatcaccaccaccaccaccatactccccaccca
gctgtcccagtttctccttccttcagtgaccctgcttgtcctgtggaaagacctcaagta
caggcgccttgtggagcaaatagcagctctggttccagctaccacgaccagcaggcattg
ccagtcgatctgagcaacagtgctctcaggactcatggaagtgggggtttccatggtgca
tctgcctttgacccttgctgccctgtctcttcttcccgggctgcagtctttggccatcag
gctgctgcagccccaactcagccattatcaatagatggctatggctccagcatggttgca
cagccccagccccagccacctccacagccttctctctcatcatgtcggcactacatgcca
cctccttatgcttccttgacaagagcactgcaccatcaagcctcagcttgccatcactct
catgggagtgctcctcctcagactcagcctccccctcaagtggattatgtgattccgcat
cctgtccatgctttccattctcagatttctactcacgcagcatctcaccctgtggcgccg
ccgcccccaacacatctaggcagtacagcggcacccatccctcagcatcttccacctgct
caccagccaatttcacaccatattccagccccagcaccttcagcccagagactgcaccct
catgaagtgatgcagaggatggaagtgcagaggaggaggctgatgcagcatcccacgcgg
gcacatgaacggcccccaccccatccacataggatgcacccaaactatggccatgggcat
catattcatgtgcctcaaaccatgtcttcacatcctcgccaggctccggagagaactgcc
tgggaactggggattgaagctggagtgactgcagctacctacacacctggtgcactgcac
cctcacctggcccattaccacgccccgcctcgacttcatcacctacagttaggagcactt
cccttaatggtccctgacatggcaggctatcctcacatccgttacatttcttcaggattg
gacggaacatcattcagaggtcctttcaggggcaattttgaggaattgattcatctggaa
gaaagattaggaaatgtcaatcgtggagcctcccagggaacaattgaaagatgcacatac
ccacataaatacaaaaaggtaacaactgattggttctcacagaggaaactgcactgcaaa
caagatggggaagaagggactgaggaagacacagaggaaaaatgtactatctgtttgtct
attttagaggaaggtgaagatgtgagacggcttccgtgtatgcacctttttcaccaagtg
tgtgttgatcagtggctgatcaccaataagaagtgccccatatgcagagtggacatcgag
gcccagctgccaagcgaaagttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (13)   
   UniProt (1)   
   RefSeq(pep) (12)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (10)   
   Pfam (10)   
All databases (46)   

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