KEGG   Rattus norvegicus (rat): 300866
Entry
300866            CDS       T01003                                 
Symbol
Lca5
Name
(RefSeq) lebercilin
  KO
K24828  lebercilin
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    300866 (Lca5)
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    300866 (Lca5)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   300866 (Lca5)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Other domain-containing proteins
  Others
   300866 (Lca5)
SSDB
Motif
Pfam: Lebercilin Mucin Tantalus
Other DBs
NCBI-GeneID: 300866
NCBI-ProteinID: NP_001380846
RGD: 1308555
Ensembl: ENSRNOG00000009580
Position
8:complement(93187735..93255060)
AA seq 727 aa
MGERDQSSDTDQERKGGKHPYSSHYSSDFGSSPQSSGPSSPVNTPPCASNREKNPKRHLS
DHHVRHQTVRKVSPKAIPNKKGVRVGFRSQSLNREPLRKDPDIVTKRVLSARLLKITELQ
NEVSELQVKLAQLLKENKALKSLQYRQEKALSKFEDAENEISQLIHRHNGEITALKERLR
KSQEKERMAEKRVKDTEGELFRTKFSLQKLKKISEARHLPERDDLAKKLVSAELKLDNTE
RKIKELSKNLELSTNSFQRQLLAERKRAFEAHDENKILQKELQRLHHKLKEKEKELDIKN
IYANRLPKSSPKKEKEIARKHASCQSDFTDLCTKAVQTAEDFEPEEFPFTAQTVLCYENR
WDGSEYLPSYLEYQERNEHGSESLSSTLEQEGKYSDDQDSCTAKQETGKSECEWEREELD
KVKGKSSLLGRTEKLVLEAGSVQTESYQAQTIDKFQDEAERLKTEMLLAKLNEINKELQD
PQSLSRPLLPLLPNFESKLYSPDRSLRPYTFSESLDRSFNGQHLSDMSFLTPRDEGQSPG
LIRSPAPSDEFSFGSYVPSFGKTPGKSNPPSQKNSLLDFQSNMSEGLSKDSLDFISRKEK
KATLMEQLFGTSASASATNTSASTTTNTTTNTNTNTNTNTNTNCNVPSKSIDSHFPAASR
GDLDPLHFLSGDRSSRVREPDGEDEDLFLSEGRSFNPNRHRLKHTSTKPTVTAVDSIDED
IEEVTLR
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgggggaaagggaccaaagttcagatactgatcaagaaagaaaaggaggcaaacaccct
tactcgtcccattactcgtctgacttcgggtcctcaccacagtcttctggcccctcgtca
cctgtcaacacgccaccatgtgccagtaatagggagaagaatcccaaaagacacctgtca
gaccaccacgtgcgccaccaaaccgttaggaaagtgagtcctaaggctatacccaacaaa
aagggggtccgagtgggatttcggtcccaaagcctcaacagagagccacttcggaaagat
ccagatatcgtaacaaagagggttctttctgcaagacttctgaaaatcaccgagctgcag
aatgaagtgtctgaactacaggtcaagttagcccagctgctcaaagaaaacaaggctttg
aaaagtctgcagtatcgtcaggagaaagcactgagtaagttcgaagatgcagagaatgaa
atctcacaacttatacaccgccataacggtgagattactgcgctcaaagaacgcttaaga
aaatctcaggagaaagagcggatggcagagaaaagagtgaaagacacagaaggggaacta
tttaggacgaaattttccctacagaaactaaaaaagatctctgaggccagacacctaccg
gagcgagacgatttggccaagaaactagtttcagcagagttaaaattagacaacaccgag
agaaagattaaggaactatcgaagaacctggagctaagcaccaacagcttccagcggcag
ctgcttgctgaaaggaaaagagcgtttgaggctcacgatgaaaataaaattctccaaaag
gagctgcagcggctccaccacaagctgaaggagaaggagaaagaattggatataaaaaac
atctacgctaatcgcctgcccaagtcctctccaaagaaagagaaagaaattgcaagaaag
catgcatcctgccagagcgactttacggacctgtgtacaaaagcagtacagaccgctgaa
gactttgagccggaagagtttcctttcacagcacagacagtcctttgttatgaaaacaga
tgggacgggtcagaatatcttccttcgtacctggaataccaggagcgaaatgagcatggg
tcagagagtctaagctcaactttggaacaagaaggaaagtacagcgacgaccaggattca
tgtactgcaaagcaggagaccgggaagtctgaatgtgaatgggaaagagaagagcttgat
aaggtgaaaggcaagtcatctttgctagggagaacagagaagctggtgttagaagctgga
agtgtccaaacggaaagttatcaagctcaaacgattgataaattccaagacgaggcggaa
agactaaagacagaaatgcttcttgccaaactgaacgaaatcaacaaagaactccaagat
ccccagagcctcagccgaccccttttgccgttgctacccaacttcgaatccaagctgtac
tctccagacagaagcctcagaccttacacgttctcggagtccttagacagatcatttaat
ggacaacatttgtcagacatgagttttttaactcccagggacgaaggccagagtccagga
ctgatcagaagtccagctccttcagatgagttctcattcggtagctacgtgccttcgttt
ggaaaaacaccaggaaagtcaaatccacctagccaaaaaaatagccttttagatttccaa
agcaacatgtctgagggcctgagtaaagacagtctagatttcatttcaaggaaagagaaa
aaggcaaccctgatggagcagctgttcggcaccagcgccagcgccagcgccaccaacacc
agcgccagcaccaccaccaacaccaccaccaacaccaacaccaacaccaacaccaacacc
aacaccaactgcaatgtcccctccaagagcattgactcacatttccctgctgccagcaga
ggtgacttggaccctcttcatttcctctccggggacagaagcagcagagtccgggagcct
gatggtgaagatgaagaccttttcctcagcgaaggaagaagttttaatccaaatagacac
cggttgaagcacacgagcactaagccaacagtcacggccgttgactctattgacgaggac
attgaagaggttaccctcagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (18)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (15)   
DNA sequence (23)   
   RefSeq(nuc) (19)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (68)   

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