KEGG   Rattus norvegicus (rat): 301065
Entry
301065            CDS       T01003                                 
Symbol
Ttc21a
Name
(RefSeq) tetratricopeptide repeat protein 21A isoform X1
  KO
K24178  tetratricopeptide repeat protein 21A
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    301065 (Ttc21a)
Cilium and associated proteins [BR:rno03037]
 Motile cilia and associated proteins
  Sperm associated proteins
   301065 (Ttc21a)
SSDB
Motif
Pfam: TPR_19 TPR_14 TPR_2 TPR_16 TPR_8 TPR_1 TPR_12 TPR_17 ANAPC3 TPR_11 TPR_7 TPR_6 TPR_9 TPR_15 PPR DUF6584 DUF1374 Coatomer_E SRP_TPR_like TPR-S RPN6_N
Other DBs
NCBI-GeneID: 301065
NCBI-ProteinID: XP_003750652
RGD: 1308806
Ensembl: ENSRNOG00000034089
UniProt: D3ZZJ4
Position
8:128544684..128580464
AA seq 1314 aa
MSSDDSSLMASIIYYCQEKYFHHVLQAANVGLERYSCDPVLQFFRAYGVLGEDRIHDAIS
ELESLQSHPDTSLCAVIALLYAHKCCDTIDAEAIQELDSSLKEIRRTASGMALYYASLFL
WFMGHHDKAREYVDHMLKVSSGSKEGYVLKGWVDLTSNKPHVVKKSIKYLEQGTQDTKDV
LGLMGKAKYFMTQQNFSGALEVVNQVTLAYSNFLPALVLKMKLFLARQDWEQTIETGQRI
LEKDENNIDAWQILAVHELVKEGNTDRAADRVRNLIKALETGEPQNPNLHLKKILAVSRL
CGRHQVVHRLVSGFLERTFMATPSCALVATELGYLFILQQQVKEASLWYKEAMKLEENRL
AALAGSIWCQILQGQLEEAAHQLEFLKEVQLSLGKSEVLVFLQALVAAKKQKLEQEATAL
LKEAVELHFSNMQGLALSPEYFEKLDPLFLVCIAKEYLHFCPKQPRSPGQLVSPLLKQVA
MILSPVVKVAPAMMEPLFVTAQVKFLSGELENAQSTLQRCLELDPTFVDAHLLMSQIYLA
QGNFAMCSHCLELGVSHNFQVRDHPLYHFIKARALNKTGDYAEAIKTLKMIIKVPTSKAE
EGRKSRGPSVRPSERASILLELVEALRLNGELHEATKIMQDAINEFSGTPEEMRITVANV
DLALSKGNADLALNMLRGITPKQPCYTEAKEKMASIYLHTRKDVRLYIGCYMELCEHLPG
PHSSLLLGDAFMNIQEPEKALEVYDEAYRKNPHDASLVSRIGQAYVKTHQYAKAINYYEA
AQKISGQDFLCCELAELLLKLKKYHKAEKVLKQALERDSGVKDIPSLMDEVKCLLLLAKV
YKSHKKEDVMETLNQALDLQSRILKRVPLEQPEMIPSQNQVAASICVQIGEHHLADKDYD
SAMKSYKDALAYSPTDSKVVLELAQLYLLQGQLDLCEQHCAPLLEMEQTHERAAVVLADL
MFRKQNYETAINLYRQVLEKAPDNFLVLNKLIDLLRRSGKLEEAPAFFELAKKVSSRVPL
EPGFNYCQGIYCWHIGQPNEALRFLNKARKDSTWGQLATCYMVQICLNPDNEIVGGEAFE
SLVGDSNSASRKESQQHGVRTAEKLLREFYPHSESGQTQLRLLQSLCLLATREKANIEVA
LGAFIEMAQAEKDNIPALLAMAQAYVLLKQVPKARTQLKRLAKVPWMLDEAEDLEKSWLL
LADIYCQGGKFDLALELLRRCLQYNKSCCRAYEYMGFIMEKEQSYKDAATNYELAWKYSH
QANPAIGFKLAFNYLKDKKFVDAIEVCHSVLTEYPNYPKIREEILEKAQGSLRP
NT seq 3945 nt   +upstreamnt  +downstreamnt
atgagcagcgatgactcctccctcatggcttcgatcatttactactgccaggaaaagtac
ttccaccacgtgctgcaggctgccaatgtgggcctagagaggtacagctgcgaccctgtg
ctgcagttcttcagagcttatggggtccttggggaagaccgtatccatgatgccatcagt
gagctggagagcctccaaagccacccagacacgtccctgtgcgcggtcatcgctctgctt
tatgctcacaaatgctgtgacaccattgacgcagaagcaattcaggagctggacagcagc
ttgaaggaaattcgcaggacggccagtggcatggcactgtactacgccagcctcttcctc
tggttcatgggtcaccacgacaaggccagggagtacgtcgaccacatgttaaaggtctcc
agtggctccaaagagggctacgtgctcaaaggctgggtggacctcacctccaataaaccc
cacgtcgtgaagaaatccatcaagtacctggaacaaggaacgcaagacaccaaagatgtg
ctaggcctcatgggcaaggcaaagtacttcatgacacaacagaacttctccggggccctg
gaggtggtgaaccaggtcaccttggcctacagcaacttcctgccggccttagtcctgaag
atgaaactgttcctggctcggcaggattgggagcagacaatagaaaccggacagagaatc
cttgaaaaagacgagaacaatatcgatgcctggcaaatcctagcggtgcatgagctcgtg
aaagaaggaaacacagacagagctgccgaccgtgtcagaaacctaatcaaggcgctagag
actggagagccccaaaatccaaacctacatcttaagaagatccttgcagtcagcaggctg
tgtgggaggcaccaggtggtccatcggcttgtgagcggcttcctggagcgcaccttcatg
gccacaccttcctgtgcccttgtggccacagagctgggctacctcttcatcctacagcaa
caagtgaaggaagcctctctgtggtacaaggaggccatgaagctggaggagaacaggctg
gctgccttggcagggagcatctggtgccagatcctacagggccagctggaggaggctgct
caccagctggagttcctcaaggaggtgcagctgtcacttgggaagtctgaggtgctggtt
ttcctgcaagcccttgtagcagctaagaagcaaaagctggagcaagaggccacggcgctc
ctgaaggaggcagtggaactgcatttctccaacatgcagggcctggccctgagccccgag
tattttgaaaagctggaccccctctttctggtctgcatcgccaaggagtatctgcatttc
tgcccgaagcagccccggtcacccggccagctcgtgtctccacttcttaaacaagtcgcc
atgatcttgagccctgtagtaaaggtggccccggccatgatggagccactgtttgtgaca
gctcaggtcaagttcctctcaggagagctggagaacgcgcagagcaccctgcagcgctgc
ctggagctggaccccacctttgtggacgctcacctcctcatgtcccagatctacctggcc
cagggcaacttcgccatgtgctcccactgtctagagctgggtgtcagccacaacttccag
gtccgagaccaccccctctaccacttcatcaaagccagggccctcaacaagactggcgac
tacgccgaggccataaagaccttaaaaatgatcataaaggtgcccacctcaaaggcagaa
gagggcaggaagtcccgaggcccctccgtgcggcccagcgagcgggcatccatcctgctg
gagctagtagaggccctccgactgaatggggaactgcacgaggccactaagatcatgcag
gatgccatcaacgagttcagtggcacaccagaggagatgcgcatcacggtcgccaacgtg
gacctggccctgagcaagggcaacgcagacctggcactgaacatgctaagaggcatcacg
cccaagcaaccctgctacacagaagccaaggagaagatggccagcatctacctgcacact
cgcaaggacgtgcgcctctacatcggctgctacatggagctttgtgaacatctgcccggc
ccccacagcagcctgctactgggtgacgctttcatgaacatccaggagcctgagaaggcc
ctggaggtgtatgacgaggcctacagaaagaaccctcacgacgcctccttggtcagcagg
attggacaagcctacgtgaagacccaccagtatgccaaggccattaattactacgaggct
gcccagaagatcagcgggcaggacttcctgtgctgcgagctggccgagctgctcctgaag
ctgaagaaataccacaaggcagagaaggtgctgaagcaggccttggagcgagactccggg
gtcaaggacatcccgtccctgatggatgaggtcaagtgcttgcttttgttggcaaaagtt
tacaagagccataagaaggaagacgtgatggaaacgctgaaccaggccttggacctccag
tcccgcatactgaaacgggttcctctggagcagccagaaatgatcccctcccagaaccag
gtggcagcctccatctgcgtccagattggagagcatcatctcgcggacaaagattacgac
agcgctatgaaatcctataaggacgccctggcctactcacctacagacagtaaggtggtg
ctggagctggcgcagctctacctgcttcaggggcagctggacttgtgtgaacagcactgt
gcccccctcttagagatggagcagacccacgagagagctgccgtggtgctggctgacctg
atgtttagaaaacaaaactatgaaaccgccatcaatctctaccgccaagtgctggagaaa
gctccagacaattttttggtactgaataaactgatcgacctgctacgacggagcggcaag
cttgaagaggcccctgctttctttgaactggccaagaaggtgtctagccgggtgcctttg
gaaccagggtttaactactgccaaggcatttactgctggcacattggacagcccaatgaa
gccttgaggtttctgaacaaagcccgaaaggacagcacttggggccagcttgccacctgt
tacatggtacagatctgtctgaaccctgacaacgagattgtcggtggagaggcttttgag
agtctggtgggtgacagcaactctgccagtaggaaagagtctcagcagcacggggtgcgc
actgcagagaagctacttcgggaattttacccacactcggagtccgggcagacccagctg
cggctgctgcagagcctctgcctgctagccaccagggagaaggcgaacatagaggtggct
ctgggggccttcatcgagatggcccaggctgagaaggacaacatccctgcactgctggcc
atggcgcaggcctacgtcctcctgaagcaagtccccaaggcccgaacgcagctgaagcgc
ctggccaaagtcccatggatgctggacgaggccgaagacctggaaaagagctggcttctg
ttggcagacatctactgccaaggcggcaaattcgacctggccttggagctgctgcgccgc
tgcttgcagtacaacaagtcttgctgcagggcctatgagtacatgggcttcatcatggag
aaagagcagtcatacaaggacgcagccaccaactacgagctggcttggaagtacagccat
caggccaaccctgccattggtttcaaactggctttcaactacctgaaagacaagaagttc
gtagatgccattgaagtctgtcacagcgtcctgacggagtaccccaactaccccaagatc
agggaggagattttggagaaagcccaagggtccttgaggccctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (21)   
   Pfam (21)   
All databases (37)   

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