KEGG   Rattus norvegicus (rat): 301085
Entry
301085            CDS       T01003                                 
Symbol
Fyco1
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1
  KO
K21954  FYVE and coiled-coil domain-containing protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    301085 (Fyco1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    301085 (Fyco1)
Membrane trafficking [BR:rno04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    301085 (Fyco1)
SSDB
Motif
Pfam: FYVE RUN GOLD_2
Other DBs
NCBI-GeneID: 301085
NCBI-ProteinID: NP_001100340
RGD: 1309069
Ensembl: ENSRNOG00000006336
UniProt: D3Z9D2 A6I4C6
Position
8:complement(132289538..132356810)
AA seq 1451 aa
MASSSTETQLQRIIRDLQDAVTELSNEFKEGGEPITDDSTSLHKFSYKLEYLLQFDQKEK
ASLLGSKKDYWDYFCACLAKVKGANDGIRFVRSISELRTSLGKGRAFIRYSLVHQRLADT
LQQCFMNTKVTSDWYYARSPFLKPKLSSDIVGQLYELTEVQFDLASRGYDLDAAWPTFAR
RTLATSSSYMWKPPSRSSSMSSLVSNYLQTQEMASSLDLNSSLNNEALESFDEMRLELDQ
LEVREKQLQEHVQQLNRENQALRMTISKQGGQLQVEKETGYLAVEDSIDLVSLVAELQKQ
GEVTQATVKKLQTCLQALELAVDQKETSHSVLQLENVAQALDAVRDSLGRKNQLLASLSE
CLTRAEKREHPSLDTKLHQEPVPTDLALKFQELKGKLQTLEGENTKAQELNRQQSLKLEQ
LAKELQLKEEARASLEHLVKDAVPLQEELSGKKQESAQLRRQLQESLAHLSSVEEELAEA
RQQEKQHREEKQLLEQEAKSLTWQLQLLETQLGQVSQLVSDLEEQKKQLMQDKDHLSQKV
GTLEQLAEAHGASKSKEAVPPQAGEMPEKGQHCLQEEQVNNATVRGADQDELQKVNQELQ
KELQNMAVRNQLLEGKLQALQTDYKALQQREAAIQGSLASLEAEQASIRQLGNQMEASLL
AVRKAKETMKAQVAEKEAALQSKEGECRQLQEEAEQCRLRTEAQAQELRALENQCQQQIQ
LIEVLSAEKGQQGLSLPQVNTAQLALSQAQLEIHQGEAQRLQNEVVDLQAKLQVALGDRD
KLQSQLGVAEAVLGEHKTLVQQLKEQNEALNRAHIQELLQCSEREGILQEESIYKAQKQE
QELRALQAELSQVRCSSEGAHLEHAELQDQLHRANTDTAELGIQVCALTAEKDRMEGALA
SLAQELQDSKEAALQERKGLELQVMQLQQEKESLQEKLKATEEAASSFSVLQAQLAQAEQ
LAQSLQEAAHQEQDALKFQLSAEIMDHQNRLKTANEECGSLRAQLEEQGQELQMTKEAVQ
ELKITKATMEEKLNCTGSHLAECQATLLRKDEESAMLRINLERTQKELEKATSKFQEYYN
KLCQEVTNRERNDQKMLADLDDLNRTKKYLEERLIELLRDKDALWQKSDALEFQQKLSAE
EKCLGDMEANHCHDCKREFSWIVRRHHCRLCGRIFCYYCCNNYVVTKPSGKKERCCRACF
QKFGESSGSPDSSGSGTSQGEPSPMVSPAEAAPQSIGSQGINPVCRPPDDAVFDIITDEE
LCQIQESGSSLPETPTETDSMDPNMAEQDTTSNSLTPEDTEDMPLGQDAEICLLKSGELM
IKLPLTVEEIASFGEGNRELFVRSSTYSLIPITVAEPGLTISWVFSSDPKSISFSVVFQE
TEDTPLDQCKVLIPTTRCNSHKESIRGQLKVRTPGIYLLIFDNTFSRFISKKVFYHLTVD
RPVIYDGSDFP
NT seq 4356 nt   +upstreamnt  +downstreamnt
atggcttctagcagcactgagacgcagctccagaggatcatccgtgatctacaagatgca
gtgacagaactaagcaatgaatttaaggaaggcggagaaccaatcacagatgacagcacc
agcttgcacaagttttcttacaaacttgagtatcttctgcaatttgatcagaaggagaag
gctagcctcctgggtagcaagaaggactactgggattacttctgtgcgtgcctagccaag
gtgaaaggagccaatgatgggattcgattcgtcaggtccatctctgagctccgaacatct
ctaggaaaggggagagccttcattcgctactctttggtgcaccagaggttggcagacacc
ttgcagcagtgcttcatgaacaccaaagtgaccagtgactggtattatgcaagaagcccc
tttctgaagccaaagctgagctctgacattgtgggccagctgtatgagctgactgaggtt
cagtttgatctagcatcaagaggctacgacttggatgccgcctggccaacatttgccagg
aggacgctagccaccagctcttcttacatgtggaaaccccccagccgaagctccagcatg
agtagtttagtgagcaactacttgcagactcaggagatggcctccagtcttgacctgaat
agttctctaaacaatgaagcactagaaagcttcgatgagatgcggctggagctggaccag
ttggaggttcgggagaaacagctacaagagcacgtgcagcagctaaacagggaaaaccaa
gcacttcgaatgacgatcagcaagcaaggggggcaacttcaggtagagaaggaaacgggg
taccttgcagtcgaggatagcattgacctcgtgagcctggtggcagagctccagaagcag
ggggaggtcacccaggccacagtgaagaagctacagacatgtctacaggctctggagtta
gctgtagaccagaaagagaccagccactcagtcttgcagcttgagaacgtggcacaggca
cttgacgctgtgagagactccttgggtaggaagaaccagcttctagccagcctttctgaa
tgcctcactagggctgaaaaaagggaacatccatctctggacacaaagcttcatcaagag
ccagttcctactgacctggccctgaagttccaggagctgaagggaaaacttcaaacccta
gaaggagagaacaccaaggcccaggagctaaacaggcagcaaagtctcaagctagagcag
ctggccaaggagctgcagctgaaggaggaagcccgagctagcctggaacacttagtgaag
gatgcggtcccacttcaggaagagctatccggaaagaagcaagagtcagctcagctccga
cgacagcttcaggaatccctggcccacttgagctctgtggaggaggagctggctgaagcc
agacagcaggaaaagcagcatcgagaagaaaaacagctactagagcaggaggccaagtct
ctgacatggcagctgcagctcctagagacccaactaggacaggtgagtcagcttgtgagt
gacctggaggagcagaagaagcaactcatgcaggacaaagaccatctcagccagaaagta
ggaacactagagcagctagctgaggcccatggggcaagtaagagtaaagaggctgtccca
ccacaggctggggagatgccagaaaaggggcagcactgcctccaggaagaacaggtaaac
aatgccacagtgcgaggggcagaccaggacgagttacaaaaggtcaaccaggagctacag
aaggagctgcagaacatggctgtgcgcaaccagctcctagaaggcaaactgcaggccttg
caaactgattacaaggcactgcagcagcgagaggcagcaatccagggctctttagcctcc
ctggaagctgagcaggccagcatccggcagctgggaaaccagatggaagcaagcctcctg
gctgtgaggaaagccaaagagactatgaaggcccaggtggcagagaaggaggctgccctg
cagagtaaggagggcgagtgccggcagctgcaggaagaggcagagcagtgccggcttcgg
acagaggcccaggcccaggagctcagagctcttgagaaccagtgccagcagcagattcaa
ctgattgaggtcctctctgcagaaaaaggccaacagggactcagcctaccccaggtcaac
acagcccaactggccctgtctcaagcacagcttgaaattcaccagggggaagcccagcgg
ttacagaatgaggtggtggacctccaggccaagctccaggtggccctaggtgatcgagac
aagttacagagccaactgggtgtggctgaggcagttctcggggagcacaagaccctggtg
caacaactgaaagaacagaatgaagccctcaacagggcccatattcaggagctgctgcag
tgctcagagagagaggggatactgcaggaggagagcatctacaaggcccagaagcaggag
caagagctacgagccctgcaggcagagctgtcacaggtgaggtgcagctctgagggagcc
cacctggagcatgcagagctacaggaccagctgcaccgagccaacacagacacagctgag
ctaggcatacaggtctgtgcactgacagctgagaaggatcggatggagggggccctggcc
agcctagcccaggagctccaggactccaaagaagcagcactacaggaacgaaagggctta
gagctccaagtgatgcaacttcagcaagagaaggagagcttgcaggaaaagctgaaggca
actgaggaggcagccagttcattctctgttcttcaggcacagctggcccaggctgagcag
ctggcccagagcctccaagaggctgcacaccaggaacaagatgcccttaagttccagcta
agtgctgagattatggaccaccagaacagactaaagacagccaatgaagagtgtgggagc
ctcagggcccagctagaagaacaaggccaggagctgcaaatgactaaggaggctgtgcag
gaactgaagatcaccaaggcgaccatggaggagaagctgaattgcaccggtagccacctt
gcagagtgccaggccactttgctacgcaaagatgaagaaagcgctatgcttcgaatcaac
ctagagagaacacagaaggaacttgaaaaggctacatcaaaattccaagaatattacaac
aaactctgccaggaggtgacaaacagggaaaggaatgaccagaagatgcttgcagaccta
gatgacctgaacagaaccaagaaataccttgaggagcggctgatagagctgctcagggac
aaagatgctctctggcaaaagtccgatgcactggaattccagcagaagctcagtgctgaa
gagaaatgtcttggggacatggaggccaaccactgccatgactgcaagcgggagttcagc
tggatagtgcggcggcaccactgcaggttatgtggccgaatattctgttactactgctgt
aacaactatgttgtgactaagcccagtggcaagaaggaacggtgctgccgagcctgcttc
cagaagtttggtgaaagctctggatcccctgacagcagtggttcgggcactagccaggga
gagcccagccccatggtgtcaccagctgaagcagctccccagtccataggaagccaagga
ataaacccagtctgcagaccaccagatgatgctgtgtttgacatcatcaccgatgaggaa
ctgtgccagatccaagaatctggctcctccttgcctgaaacacccaccgaaactgattcg
atggacccaaatatggctgaacaggacaccacatcaaactcattaacccctgaagacact
gaagacatgcccctggggcaggatgctgaaatctgcttgctgaagtcaggagagctgatg
atcaaattacccctcacagtagaggagatcgccagctttggggagggaaacagggagctg
tttgtgaggtccagtacctacagcctgatccccatcaccgtggctgagcccggccttacc
atcagctgggtcttctcttctgatcccaagagcatctccttcagtgtggtcttccaagag
acagaagacacgccactcgaccagtgcaaggtcctcattcccaccacacgctgcaattcc
cacaaggagagcatccggggccagctgaaggtccgaacccctggcatctacttgctcatc
tttgacaacaccttttccagatttatctccaaaaaagtattttaccacctgaccgttgac
cggcctgtgatctacgatggaagtgatttcccatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system