KEGG   Rattus norvegicus (rat): 301271
Entry
301271            CDS       T01003                                 
Symbol
Ptchd4
Name
(RefSeq) patched domain-containing protein 4 isoform X2
  KO
K24682  patched domain-containing protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    301271 (Ptchd4)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Other domain-containing proteins
  Patched domain-containing proteins
   301271 (Ptchd4)
SSDB
Motif
Pfam: Patched Sterol-sensing
Other DBs
NCBI-GeneID: 301271
NCBI-ProteinID: XP_008765136
RGD: 1563020
Ensembl: ENSRNOG00000012708
UniProt: A0A8I6AYQ0
Position
9:complement(25951395..26163296)
AA seq 901 aa
MRRPGAPASWIWWRMLRQVLRRGLQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNR
FQTESDLERLVAPSHSLAKIERSLASSLFPLDQSKSQLYSDLHTPGRYGRVILLSPPGDN
ILLQAEGILQTHRAVMEMKVNHKGYNYTFSHLCVLRNQDKKCVLDDIISVLEDLRQAAVS
NKTTARVQVRYPNTKLKDGRNSFIGHQLGGVVEVPNSKDQRVKSARAIQITYYLQTYGSA
TQDLIGEKWENEFCQLMRKLQDEHQDLQLYSLASFSLWRDFHKTSILTRSKVLVSLVLIL
TTATLSSSMKDCLRSKPFLGLLGVLTVCISIATAAGIFFITDGKYNSTLLGIPFFAMGHG
TKGVFELLSGWRRTKENLPFKDRVADAYSDVMVTYTMTSSLYFITFGMGASPFTNIEAVK
IFCQNMCVSILLNYFYIFSFFGSCLVFAGQLEQNRYHSIFCCKIPSAEYLDGKPVWFQTV
MSDGHQQTSHHETNPYQHHFIQHFLREHYNEWITNIYVKPFVVILYLIYASFSFMGCLQI
SDGASIINLLASDSPSVSYAMVQQKYFSNYSPVIGFYVYEPLEYWNSSVQEDLQRLCSGF
TAVSWVEQYYQFLKASNISANNKTDFISVLQSSFLKKPEFQHFRNDIIFSRAGDENNIIA
SRLYLVARTSRDKQKEVIEVLDKLRPLSLSKSIRFIVFNPSFVFTDHNSLSVTVPVLIAG
FGVLLVLVLTFFLVIHPLGNFWLILSVTSIELGVLGLMTLWNVDMDCISILCLIYTLNFA
IDHCAPLLYTFVLATEHTRTQCIKSSLQEHGTAILQNITSFLIGLVPLLFVPSNLTFTLF
KCLLLTGGCTLLHCFVILPVFLTFFPPSKKHHKKKKRAKRKEREEIECIEIQENPDHVTT
V
NT seq 2706 nt   +upstreamnt  +downstreamnt
atgcgacggccgggagcgcctgcgagctggatctggtggaggatgctgcggcaggtgctt
cgcagagggctccagtcattctgccacaggctgggcttatgcgtgagccggcacccggtc
tttttcctcaccgtgccggcagtcctgaccatcaccttcggcctcagcgcgctcaaccgc
ttccagaccgagagcgacctggagcgcctggttgctcccagccacagcctggccaagatc
gagcgcagcctagccagcagccttttccccctggaccagtccaaaagccagctctattcg
gacttacacacccctgggaggtatggcagggtgatcctcctctccccacccggggacaat
attttgctccaggctgaggggatcctgcagacccaccgagccgtgatggaaatgaaggtg
aaccacaagggctataattatactttttcccatctgtgtgtgttgagaaatcaggataag
aaatgcgtgctggatgatattatttcagtgctagaggatctcaggcaggctgccgtctcc
aataagacaacagccagggtgcaagtaaggtatcccaacactaaattaaaggatgggagg
aacagttttattggacaccagctgggcggggtagtggaagtgccaaacagcaaagaccag
cgggtcaagtcagccagagccattcaaatcacctactacctccagacctatggttctgcc
actcaagacctcataggggagaagtgggagaatgagttctgtcagcttatgaggaagctc
caggatgagcaccaagacctccaactgtactctctggcatcttttagcctgtggagagac
tttcataagaccagcatcctgaccagaagcaaggtcctggtgagcctcgtgctgatcctg
accacagccaccctgtccagctccatgaaggactgcttgcgcagtaagcccttcctgggc
ctcctgggggtgctcacggtatgcatttccatcgccactgcagccgggatcttcttcatc
actgatgggaagtacaactccaccctgctgggaatccctttcttcgccatgggtcatgga
actaaaggagtatttgagcttctgtctggatggcggagaaccaaagagaatttacccttc
aaagacagggtagcagacgcctattctgatgtgatggtcacctacaccatgaccagttcc
ctgtacttcatcacgtttggtatgggtgccagccccttcacaaacatagaggcagtgaag
atcttctgtcagaatatgtgtgtctctattctattgaactacttctacattttctctttc
tttggctcttgcctggtctttgctggacaacttgagcaaaatcgataccacagcatcttt
tgctgtaagatcccttctgcagaatacctggacggcaagcctgtgtggttccagacagta
atgagtgatgggcaccaacagacatcccatcatgagacaaacccctaccagcaccatttc
atccagcacttcctccgagaacattacaatgagtggattaccaatatctatgtgaagcca
tttgtggtcatcctgtatctcatttatgcctctttctccttcatggggtgcttgcagatc
agtgatggagccagcattatcaacctactagccagtgactcaccgagtgtgtcctatgcc
atggttcagcaaaaatatttcagcaactatagccctgtaataggattctacgtctatgaa
cccctggagtactggaacagcagcgtccaggaggatctgcagaggctctgtagtgggttc
actgcagtgtcctgggtggaacagtactaccagtttctaaaagcgagcaacatcagtgcc
aataacaagaccgacttcatcagtgtcctacaaagctcgtttttaaaaaagccagagttt
caacactttcggaatgatatcattttctccagggctggggatgaaaacaacatcatcgct
tctcgcttatatctggtggccaggactagcagggacaagcagaaggaagtcatcgaagtt
ctggacaagttgaggcccctgtctctctcaaagagtatccggttcatcgtgtttaaccct
tcctttgttttcacagaccataatagtctgtcagtcactgtgcctgttctgatcgcaggc
tttggggttctcctggtgttagtcctgactttcttcctagtgatccatcctctgggaaat
ttctggctaattcttagtgtcacctcaattgagctgggcgttctgggcttaatgacattg
tggaatgtcgacatggattgcatttctatcttgtgccttatctacactttaaattttgcc
attgaccactgtgcaccactgctttacacatttgtactagcgactgagcacaccagaaca
caatgtataaaaagctccctgcaagagcatgggacagccattttgcaaaacattacttct
tttcttattgggttggtccccctcctctttgtgccttcaaacctgaccttcacactgttc
aaatgcttgctgctgaccgggggttgcacgcttctgcactgttttgttatcttacctgtg
ttcctaaccttttttcctccttccaaaaagcaccacaagaaaaagaaacgtgccaaacga
aaggagagagaggaaattgaatgcatagaaatccaagagaacccagaccatgtcaccaca
gtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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