KEGG   Rattus norvegicus (rat): 301295
Entry
301295            CDS       T01003                                 
Symbol
Efhc1
Name
(RefSeq) EF-hand domain-containing protein 1
  KO
K23029  EF-hand domain-containing protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    301295 (Efhc1)
   04812 Cytoskeleton proteins [BR:rno04812]
    301295 (Efhc1)
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    301295 (Efhc1)
Cilium and associated proteins [BR:rno03037]
 Motile cilia and associated proteins
  Other motile cilia associated proteins
   301295 (Efhc1)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule-associated proteins (MAPs)
     301295 (Efhc1)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 EF-hand domain-containing proteins
  Other EF-hand domain-containing proteins
   301295 (Efhc1)
SSDB
Motif
Pfam: DM10_dom EF-hand_7 EF-hand_6 EF-hand_1 GA-like
Other DBs
NCBI-GeneID: 301295
NCBI-ProteinID: NP_001116419
RGD: 1587365
Ensembl: ENSRNOG00000042729
UniProt: D3ZD71
Position
9:30872238..30910703
AA seq 648 aa
MVTNPVHGLPLLPGSSFTDSTKTAFHRSQTLGYRNGYAFVRRPTMGIGGDRLPYNQLSPA
ELDELANKAPILTYGPLKQAAPAEFVPAHVAFDKKVLKFSAYFQEDVPISMEEHYRIRRV
NIYYYLEDDSMSVIEPVVENSGIPQGKLVKRQRLAKNDVGDHYHWKDLNRGINLTIYGKT
FRIVDCDRFTQDFLESQGIELNPSEKMPLDPYTELRKEPVRKYVTPSDFDQLKQFLTFDK
QVLRFYAIWDDTDSLFGECRHYIIHYYLMDDTVEIREVHERNNGRDPFPLLMNRQRMPKV
LVDNGKNFPQCVLEISDQEVLEWYTAKDFIVGKPLTILGRTFFIYDCDPFTRQFYKDKFG
MSDLPRVDVSKKEPPPVKQELPPYNGYGLIEDSAQNCFALVPKAPRKDIVKMLMNDNKVL
RYLAALESPIPEDKDRRFVFSYFLATDMISIFEPPVRNSGIIGGKFLGRTKVVKSFSPVD
NPIYYGPSDFFIGAVIEVFGHRFVILDTDEYVLKYMESNASQYSPEALASIQNRIRKQDS
PAPELECKQATEETKALATEELKAQGLDKLIEKIQMHLKDISCKDNLRERFQVYDKEESG
YVDKETFFKVCETLNVPVDDSLIKELIRLCTHGEGRINYYNFVRAFSD
NT seq 1947 nt   +upstreamnt  +downstreamnt
atggtgaccaacccggtgcacggcctgcccttactcccgggctcgtcctttacggactcc
acgaaaacagcattccacagaagccagacactcggctacaggaatggctatgcatttgtc
cgacgtccaaccatgggcataggtggagaccggctcccctacaaccaactgtctccggct
gagctggatgagttggccaataaggcacccatcttgacttatggcccactcaagcaggcc
gcaccagcagagtttgttcctgcgcatgtggcttttgacaaaaaggtgctgaaatttagc
gcctacttccaagaagatgttcccatatcaatggaggagcattaccgaatccgccgggtg
aacatttactactacctagaggatgacagcatgtctgtcatcgagcctgtcgtggagaac
tctgggatcccacaaggcaagctagtcaaacgccagcgactagccaagaatgatgtggga
gaccactaccactggaaggacctgaaccgtggaatcaaccttacaatttatggcaaaacc
ttccgcattgttgactgcgaccgattcactcaggattttttggaaagtcaaggcattgaa
ttaaatccatcagagaagatgcctctagacccttacactgaactccgaaaagaacctgtt
cgaaaatatgtcaccccatcagactttgaccaactgaagcagtttctcacctttgacaaa
caagtccttcgattctacgcgatctgggacgacacggatagcttgtttggagagtgtcgc
cactacatcattcattactacctcatggatgacactgtggagatccgtgaggtccacgaa
cggaacaacgggagggaccccttcccactcctcatgaaccgacagcgcatgcccaaagtt
ttggtggataacggaaagaatttccctcagtgtgtgctggaaatctccgatcaagaggtg
ttagagtggtacactgccaaggacttcatcgtgggaaagccactcaccatcctcgggagg
accttcttcatttatgactgtgatccgttcacccgacagttctacaaagacaagtttgga
atgtccgatttaccacgagttgacgtgagcaagaaggagccgcctcctgtaaaacaggag
ttgcctccttataatggttatgggctaatcgaagactctgctcagaattgttttgctctc
gttcccaaagctcccagaaaagatattgttaagatgctgatgaacgacaacaaggtgctc
cgctacctggcggcactggaatcccctatcccagaagacaaagaccgtcgctttgtcttc
tcttattttcttgccacagatatgatcagtatctttgagccacctgttcgaaattctggg
atcatcggaggcaaattcctgggcaggactaaagttgttaaatcattctctccagtcgac
aaccccatctactatggaccaagtgacttcttcatcggtgctgtgattgaggtgttcggt
catcggtttgttatccttgatacagatgagtatgttttaaaatacatggagagcaatgct
tcccagtactcaccagaagccctcgcctcaatccagaaccgtatccggaagcaggattct
cctgcaccagaactggaatgcaagcaagctacagaagaaaccaaggcactggctacagag
gaactcaaggcacagggcctggacaaactgatagaaaaaatccagatgcacctgaaggac
atttcatgcaaagacaacctccgggaaaggttccaagtatacgacaaggaggaatcggga
tatgtggacaaagagacgttctttaaagtctgcgaaactcttaatgtcccagtcgacgac
tcgttgattaaggagttgatcaggctgtgcacccatggagaaggcaggattaactactat
aactttgttcgagctttctcggactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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