KEGG   Rattus norvegicus (rat): 302502
Entry
302502            CDS       T01003                                 
Symbol
Cul4b
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03420  Nucleotide excision repair
rno04120  Ubiquitin mediated proteolysis
rno05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    302502 (Cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    302502 (Cul4b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    302502 (Cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    302502 (Cul4b)
   03400 DNA repair and recombination proteins [BR:rno03400]
    302502 (Cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    302502 (Cul4b)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     302502 (Cul4b)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      302502 (Cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      302502 (Cul4b)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   302502 (Cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 302502
NCBI-ProteinID: NP_001100421
RGD: 1564494
Ensembl: ENSRNOG00000002585
UniProt: A6JMK5 D3ZK73
Position
X:complement(122154332..122192299)
AA seq 971 aa
MSRSTKSRERRENDANSEDNSSETSNQERRRCLQGPPRPPYPPLLPPVFPPPTPPPQVRR
TRGLQDLGAMKSVCPGTSGFSSPNPSAASAAAQEVRSATDGNTSTTPPTSAKKRKLNSSS
SSSSSNSSNEREDFDSTSSSSTPPQPRDSASPSTSSFCLGVPVATSSHVPIQKKLRFEDT
LEFVGFDTKMAEESSSSSSSSSPTAATSQQQQQQLKNKSILISSVASVHHANGLAKSSTT
VSSFANSKPGSAKKLVIKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQ
AVENLCSYKISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIM
IRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQTKTIDGILLLIERERNGEA
IDRSLLRSLLNMLSDLQIYQDSFEQRFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLE
EEADRLITYLDQTTQKSLIASVEKQLLGEHLTAILQKGLNSLLDENRIQDLSLLYQLFSR
VRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDTCFLKNEKFIN
AMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDV
FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF
KQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQ
WQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTL
QSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERV
FQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERD
KENPNQYNYIA
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgtcacgttcaactaagtctagagaaagaagagagaatgatgccaactcagaagataac
agttcagaaacctccaatcaagagcgccgaaggtgtctccaaggcccgccccgtcctccc
tatccacctcttttacccccggtgttccctcccccaacccccccacctcaagtccggcgg
acccgggggcttcaggatctgggagctatgaaaagtgtctgcccaggcacttccggtttt
tcttcccccaatccctctgctgcttctgctgctgctcaggaggtcagatctgccactgat
ggtaataccagcaccactccgcccacctctgccaagaagagaaagttaaacagcagcagc
agcagtagcagcagtaacagtagtaacgagagagaagactttgattccacctcttcctcc
tccacccctccacaacccagagattcggcgtccccttcaacctcatccttctgcctcggg
gttccagtggccacttccagccacgtacctatacagaagaagctgcgttttgaagacacc
ctggagtttgtagggtttgatacgaaaatggctgaggaatcttcctcctcatcttcctca
tcttcaccaactgctgcaacctcacagcagcaacagcagcaacttaaaaataagagtata
ttaatttcttcggtggcttcagtgcaccatgcaaacggcctggctaaatcttctaccacg
gtctctagctttgctaacagcaagcctggctcagctaagaagttagtgatcaagaacttt
aaagataagcctaaattaccagaaaactatacagatgagacatggcaaaagctaaaagaa
gcagtggaagccattcagaatagtacttcaattaagtacaatttagaagaactctaccag
gctgtagaaaatctttgttcttacaagatttctgccaatttgtataagcagctgaggcag
atctgtgaagatcacatcaaagcacagattcatcagttcagagaggattcattggatagt
gttctttttctaaaaaagattgatagatgctggcaaaatcattgtaggcaaatgataatg
atcaggagcatttttttgtttctggatagaacttatgttcttcagaattcaatgctgccc
tctatttgggacatgggattagagttatttagggctcatattataagtgatcaaaaagtc
cagacaaaaacaatcgatggcatccttctcttgattgagagagagcggaatggtgaagca
attgatagaagtttacttcgaagccttttaaatatgctgtctgacttgcaaatttaccaa
gactcttttgaacaacgatttttgcaagaaactaatcggctttatgcggccgaaggtcag
aagttaatgcaagaaagagaggttcctgagtatcttcatcatgttaataaacgcctagaa
gaagaagcagacagacttattacttacttagatcagaccacccagaagtcactgattgct
tctgttgaaaaacaacttctaggtgaacacttaacagcaattcttcagaaaggtttaaat
agcctccttgatgaaaaccgaattcaagatctgtctctcctgtatcagctcttcagtaga
gttcggggaggagttcaggttctcctacagcactggattgagtatatcaaggcttttgga
agtaccattgttattaatcctgaaaaagataaaactatggttcaagaattattggacttt
aaagataaagttgaccatataattgatacctgctttctgaaaaatgaaaaatttatcaat
gccatgaaagaagcatttgaaaccttcattaataaaagaccaaataagccagctgaactg
atagctaagtatgtggattcaaaacttcgtgcaggcaacaaagaagctacagatgaagag
cttgagaaaatgttggataaaataatgattatatttagatttatctatggcaaagatgtt
tttgaggccttctataagaaagacttagccaaacgcctattagttggcaagagtgcatca
gtggatgctgaaaaatcaatgctgtccaaactgaaacacgaatgtggagccgcttttacc
agcaagcttgaaggcatgtttaaagacatggagctttctaaagatatcatgatccagttc
aaacagtatatgcagaaccagaatgtacctggcaatattgaattaactgttaatatcctg
acaatgggttattggccaacatatgtgcctatggaagtccatttgccaccagagatggtg
aagcttcaggaaattttcaagacattttacttaggcaagcacagtggcaggaaacttcaa
tggcaatcaaccttgggacactgtgtgctaaaagctgaatttaaagagggcaaaaaagaa
cttcaggtctctctttttcaaaccctggtgctactaatgtttaatgaaggagaggagttc
agtttagaggagataaagcaagccactggaatagaggatggagaattaagaagaacactg
cagtcactagcctgtggcaaagctagagttctggctaaaaatccaaagggcaaagatatt
gaagatggtgacaagtttatttgtaatgatgatttcaaacacaaactattcaggataaag
atcaatcaaatccagatgaaagaaacggttgaagaacaagcaagcactacagaaagagta
tttcaagatagacagtaccaaattgatgctgcgatcgtccgaattatgaagatgagaaaa
acacttagccacaaccttcttgtttcagaagtctacaatcagctaaaatttccagtaaaa
cctgctgatcttaagaagagaatagaatccctaattgaccgggactacatggaaagagat
aaagaaaacccaaatcagtacaactatattgcatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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