KEGG   Rattus norvegicus (rat): 302516
Entry
302516            CDS       T01003                                 
Symbol
Nyx
Name
(RefSeq) nyctalopin precursor
  KO
K08129  nyctalopin
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:rno00535]
    302516 (Nyx)
Proteoglycans [BR:rno00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class IV
    302516 (Nyx)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_5 LRR_9 LRRNT DUF5928
Other DBs
NCBI-GeneID: 302516
NCBI-ProteinID: NP_001094437
RGD: 1561300
Ensembl: ENSRNOG00000009646
UniProt: A6JZY0 F7EKE5
Position
X:complement(11953680..11974716)
AA seq 476 aa
MLNLLLYAVVFSLPCTRATEACLRACPAACTCSNVERGCSVRCDRAGLQRVPTEFPCEAA
SIDLDRNGLRILGERAFGTLPSLRCLSLRHNNLSFITPGAFKGLPRLAELRLAHNGELRY
LHVRTFAALGRLRRLDLAACRLFSVPERLLAELPALRELTAFDNLFRRVPGALRGLANLT
HAHFERSRIEAVASSSLLGMRRLRSLSLQANRVRAVHAGAFGDCVALEHLLLNDNLLASL
PAAAFRGLRRLRTLNLGGNALGSVARGWFSDLAELELLYLDRNSITFVEEGAFQNLSGLL
ALHLNGNRLTVLSWAAFQPGFFLGRLFLFRNPWRCDCHLEWLRDWMEGSGRVADVACASP
GSVAGQDLSQVVFERSSDGICVDPDELNFTTFSPGPSPEPVATTVSRFSSLLSKLLAPRA
PVEEVANTTWELVNVSLNDSFRSHGVMVMCYKATFLFTSCLWLSLAQYVVLGPQRD
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgctgaacctgcttctttatgcggtggtcttcagcctgccctgcacccgggccaccgag
gcctgtctgcgggcctgccctgcggcctgcacttgcagtaacgtggagcgtggctgctca
gtgcgctgtgaccgtgcgggcctccagcgggtgcccactgagtttccgtgtgaggcggcc
tccatcgacctagaccggaatgggttgcgcatcctgggcgagcgggcctttggcacgctg
ccatcgttacgctgcctgtcgctgcgccacaacaacctgtcctttattacgcctggcgcc
ttcaagggcctgccgcggttggccgagctgcgcctggcgcacaatggtgagctacgctat
ctgcacgtgcggaccttcgcggcgctgggtcgcctgcgccgcctggacctggcggcctgc
cgcctcttcagcgtgcccgagcgtctcctggccgagctgccggccctgcgtgagctcacg
gccttcgacaatctcttccgccgggtgcccggcgcgctccgtggcctggctaacctgacg
cacgcgcatttcgagcgcagccgcatcgaggctgtggcctccagctcgctgctgggcatg
cggcgtctgcgctcgctcagcctgcaggccaaccgcgtgcgcgcagtgcatgccggggcc
tttggcgactgcgtggccctggagcacctgctgctcaacgataacctgctggcctcgctg
cctgccgccgccttccgcggccttcgccgcctgcgcaccctcaatctgggcggcaacgcg
ttgggcagcgtggcgcgcggctggttctccgacctggcagagctcgagctgctttaccta
gatcgcaacagcatcacctttgtggaggaaggcgccttccagaacctctcgggcctcctg
gccctgcatctcaatggcaaccgcctcactgtgctctcctgggccgctttccagccaggc
ttcttcctgggccgcctttttctcttccgcaacccttggcgctgtgactgccacctggag
tggttgcgtgattggatggagggctctgggcgtgtggctgatgtggcatgcgcctcccct
ggctctgtggccggccaggacctcagccaggtggtctttgagcgctcctctgatggcatc
tgtgtggaccctgatgagctgaacttcaccacgttcagtccaggcccgagtccagagcca
gtggccaccactgtgagcagattcagcagcctcctctccaagctgctggccccaagggcc
cctgtggaggaggtagccaacaccacctgggagctggtcaatgtctccttgaatgacagt
tttcggtcccatggagtgatggtcatgtgctacaaggccacgtttctcttcacttcttgc
ctctggctcagcctggcccagtatgtggtgttgggtccacagagggactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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