KEGG   Rattus norvegicus (rat): 302591
Entry
302591            CDS       T01003                                 
Symbol
Nxf3
Name
(RefSeq) nuclear RNA export factor 3
  KO
K14284  nuclear RNA export factor
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03008  Ribosome biogenesis in eukaryotes
rno03013  Nucleocytoplasmic transport
rno03015  mRNA surveillance pathway
rno05014  Amyotrophic lateral sclerosis
rno05164  Influenza A
rno05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    302591 (Nxf3)
   03015 mRNA surveillance pathway
    302591 (Nxf3)
   03008 Ribosome biogenesis in eukaryotes
    302591 (Nxf3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    302591 (Nxf3)
   05168 Herpes simplex virus 1 infection
    302591 (Nxf3)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    302591 (Nxf3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    302591 (Nxf3)
   03009 Ribosome biogenesis [BR:rno03009]
    302591 (Nxf3)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     302591 (Nxf3)
   mRNA cycle factors
    Stress granule specific factors
     302591 (Nxf3)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    302591 (Nxf3)
SSDB
Motif
Pfam: Tap-RNA_bind TAP_C NTF2 ACC_central
Other DBs
NCBI-GeneID: 302591
NCBI-ProteinID: NP_001178660
RGD: 1564923
Ensembl: ENSRNOG00000028751
UniProt: F1M355
Position
X:complement(103817508..103842038)
AA seq 557 aa
MESRSETNPFRRRMRCRRIFRRRFLNSTEYISDTMRTSFYHQQDEELAMSNAPMYTRRRY
TPYGILSHHQRINLHKWDQMNVNMEEGAKPPERKMERDKQDDTSENWFKVTIPFGIKYDK
KWMLNLIQSQCSIPFTPVQFHYEKMQATFFVDDPNIAFMLKAISDKIRDETDNKPQSHIT
PSVILQLTMNQQCDTSQRILNRQRLSFDQDLTTYPTDLVLSPRRYMTPSLNISEEDVTQA
NSEGKMAKEQASDIEEICAVKSSLSTTMPDKSSNINSILELFPKLLSLDGQESCKPALCG
PEDQKTISTYKRSFFESESIKTLVLQFLQQYYFIYDNGDREGLLNAYHADACFSLTVPFS
TMDLSASSVCEYVKYSRSMKVLKDPYMRKQLLKHKKCDIIHFLRALPKTQHDLTSFSVDI
CFQTEKTLCFSVSGLFKEVEGSSQGCFHAFTRIFVATWDNSDLCIINDKLSVRNVYGFPS
ASNAVDTCSSSRLPSLSQDQQQMMPTFCSQSGVNVERSQKCLHDDQWNYNKAIQSFALLK
VKDTVPEDKTTHTSPRS
NT seq 1674 nt   +upstreamnt  +downstreamnt
atggagtccaggtctgaaactaaccccttccgaagaagaatgagatgccgacgtattttc
cgacggagatttctcaactcgactgagtacatcagtgacacgatgcgtacttcattttat
caccagcaagatgaagagctagcaatgagtaatgctcccatgtatactcgaagaagatac
actccatatggcattctgtcccatcatcaaagaatcaatttacataaatgggaccaaatg
aatgttaatatggaggagggcgcaaaacctccagagagaaaaatggagagagacaaacaa
gatgacacttcagagaactggttcaaggtcacaattccctttggcataaaatatgataag
aagtggatgctgaatttgattcagagccagtgcagcatccctttcactccagttcagttt
cactatgaaaaaatgcaggccactttttttgttgatgatcccaacattgcctttatgctg
aaggctatcagtgacaagattcgagatgagactgataataagcctcagagtcacataact
ccatctgtaattctgcagctgactatgaaccaacagtgtgatacttctcagcgcattctt
aataggcagagactctcctttgaccaagatttgacgacctatcctactgacttggtactg
agtcctagaaggtatatgactccttccttgaatatctctgaagaggacgtgacccaggca
aactctgaaggaaagatggccaaggaacaagcctcagacatagaagagatatgtgcagtc
aaaagctctctgagtactaccatgccggataagtccagtaacataaattcaattctggaa
ttgtttcccaagttactaagcctggatggacaggagtcatgtaaaccagctctctgtggc
cctgaagatcaaaagaccatatcaacgtacaagagaagtttttttgaatctgagtccata
aagacactggtcctacagttcctgcagcaatattacttcatctatgacaatggagatcgg
gagggactcctcaatgcttaccacgctgatgcttgcttctcattgaccgtccctttcagt
accatggacttatccgcgagcagcgtgtgtgagtacgtcaagtatagcagaagtatgaag
gttctcaaggatccttatatgcggaagcagctgctaaagcacaagaaatgtgacattatt
cacttccttcgtgcattgcccaaaactcaacatgacttgacctccttctcggtggacata
tgtttccaaacagaaaaaactctctgcttctctgttagtgggttgttcaaggaagtggag
ggcagctctcaagggtgttttcatgccttcactcggatcttcgttgctacctgggacaat
tcagacctttgtatcatcaatgacaagctgtctgtgaggaatgtctatgggtttcccagt
gcctccaacgctgtggacacatgctcctccagccgtttgccttccctctctcaagatcaa
cagcagatgatgccaacattctgttcccagtctggcgtgaatgttgagaggtctcaaaaa
tgccttcatgatgaccagtggaattacaacaaagccatacaaagctttgctttgctcaag
gtaaaggacacggtcccagaggacaagaccacccatacaagtccaagatcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

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