KEGG   Rattus norvegicus (rat): 302879
Entry
302879            CDS       T01003                                 
Symbol
Smptb
Name
(RefSeq) polypyrimidine tract-binding protein
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: RRM_5 RRM_1 RRM_8 RRM_occluded Seipin Nup35_RRM
Other DBs
NCBI-GeneID: 302879
NCBI-ProteinID: NP_877970
RGD: 727953
Ensembl: ENSRNOG00000066859
UniProt: Q80XZ1 A0A8I6AAX2
Position
X:complement(19316019..19317901)
AA seq 588 aa
MSRNSPPAAEGNGSKRFKGDSWGTRDPSRLVHILRLPSCVTEGEILCLALPFGEVSNLLF
LRAKNQAFVEMSTEESANTMINYYTWMPPVLRGQPVHIQFAHYRELKVSSSPSQEISLSQ
AGDSREATASSLVAVPGQAAASGQTAVPSQLGAQPCLPPEDSYQAGTVALAPPASAVDTE
LVVAWQSPVLRILVENYFYRVTLEVLHQIFSRFGTVLKIITCTKNNRFQALLQYAHVMSA
ERAKLFLDGQNIYDACCTLRISFSGLTNLMVKYNNDKSRDYMRPDLPSDDSQPSPVQVQN
MASALPAPAMSSASPYASIALPHTFAIPQAAGLANPEVFKTLHPQAIQEVAMASSSSSSS
TAAAAVGAAEIAAAAVPGAEGSMVTSGSPGVGSPVLLVANLNQEKVTPRSLFILFGAYGD
VHRVKILFNRKENALVQMADGSQAELALRHLNGHKLYGKALCILLSKHQSVKLPREGKED
QGLTKDYANSPLHRFKKPGSKNFQNIFPPSATLHLSNLPSLVSEEELKNLFSSNGYAVKA
FRFFPKNHKMALIRMGSTEEAIQALVDLHGHLLGQNHHMRVSFSRMTI
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgagcagaaactcgccccccgcagctgaaggaaatggcagcaagaggttcaaaggagac
agctggggcacccgggacccctccagactggtccacatcctcaggctgccaagctgtgtc
accgaaggagagattctctgtctcgctctgcctttcggggaggtctccaacctactgttt
ctgagggcgaagaaccaggccttcgtggagatgagcacagaggagtccgccaacaccatg
atcaactactacacctggatgcctcctgtgctgcgtgggcagcccgttcacattcagttc
gcccactacagggagctcaaggtaagcagctcccccagccaggagatttccctgagtcag
gcgggtgactctagggaagccactgcctccagtctggtggctgttcctggccaggctgct
gccagtggccagactgctgtccccagccagttgggtgctcagccatgcctgccacctgag
gattcctaccaggcagggactgtggccttggccccccctgcctctgctgtggacacggag
ttagtggtggcctggcagagccctgtgctcaggatacttgtggagaactacttttaccga
gtgaccttggaagtgctgcaccaaatcttctccaggtttggcacagttttaaaaatcatc
acctgtaccaagaacaaccggttccaggcgctgttacagtatgcccacgtgatgagtgcc
gagcgtgccaagctgttcttggatgggcagaacatctacgacgcctgctgtacactgcgc
atttccttctccgggctcaccaacctcatggtcaagtacaacaacgacaagagccgcgac
tacatgcgcccagacctgccctcagatgacagtcagccctctccggtccaggtccagaac
atggcctcagctctccctgcacctgccatgagctcagcctctccctatgcaagcattgcg
ttaccccacacctttgcaattcctcaagctgcaggcttggccaacccagaagtttttaag
accctgcacccccaagccatacaggaagtggcaatggcatcatcatcatcatcatcatca
acagcagcagcggcagtaggagcagcagaaatagcagcagcagcagtacctggagcagag
ggctcaatggtcacctcaggctccccgggtgtggggagccctgtcctcctggttgccaac
ctcaaccaagagaaagtcacaccccgaagcctcttcattctctttggtgcctatggcgat
gtgcaccgagtgaagatcttgttcaacaggaaggagaacgcgctagtgcagatggcagat
gggagtcaggctgagctggccttgaggcacctgaatgggcacaagctgtatgggaaggct
ctctgcatcctgctgtccaagcaccagagtgtgaagctgccccgggagggcaaggaggac
cagggcctcaccaaggactatgccaactccccgctgcaccgctttaagaagcccggatcc
aagaacttccagaacatctttccgccctcagccaccctgcacctctccaacctaccctcc
ttggtgtctgaggaagagctcaagaacctcttctccagcaacgggtatgctgtcaaggcc
tttaggttcttccccaagaaccacaagatggcactgatccggatgggctccacagaggag
gccatccaggctcttgtagacctgcatggtcacctcctaggccagaaccaccacatgcga
gtctccttctccaggatgactatctag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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