KEGG   Rattus norvegicus (rat): 302973
Entry
302973            CDS       T01003                                 
Symbol
Abca3
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
  KO
K05643  ATP-binding cassette, subfamily A (ABC1), member 3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    302973 (Abca3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    302973 (Abca3)
Transporters [BR:rno02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA1, 2, 3, 4, 7, 12, 13 subgroups
    302973 (Abca3)
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 AAA_21 AAA_23 AAA_15 RsgA_GTPase AAA_22 AAA_30 AAA_29 MukB
Other DBs
NCBI-GeneID: 302973
NCBI-ProteinID: NP_001382963
RGD: 1307174
Ensembl: ENSRNOG00000050057
Position
10:13886948..13944286
AA seq 1704 aa
MVVLRQLRLLLWKNYTLKKRKVLVTVLELFLPLLFSGILIWLRLKIQSENVPNATVYPDQ
HIQELPLFFSFPPPGGSWELAYVPSHSDAARTITEAVRREFMIKMRVHGFSSEKDFEDYV
RYDNHSSNVLAAVVFEHTFNHSKDPLPLAVRYHLRFSYTRRNYMWTQTGNLFLKETEGWH
TASLFPLFPSPGPREPSSPDGGEPGYIREGFLAVQHAVDKAIMHYHANASAHQLFQKLTV
ITKRFPFPPYISDPFLIAIQYQLPLLLMLSFTYTSLTIIRAVVQEKEKKLKEYMRMMGLS
SWLHWSAWFLMFLLFSLIVVSFMTLLFCVKVKKDIAVLSNSDPSLVLAFLLCFAISSISF
SFMVSTFFSKANMAATVGGFLYFFTYTPYFFVAPRYNWMTLSQKLLSCLLSNVAMAMGAQ
LIGKFEAKGTGIQWCDLLNPVNVDDDFCFGQVLGMLLLDSVLYGLVTWYVEAVFPGQFGV
PQPWYFFLMPSYWCGNPRTVVGKEEEGGDPEKAFRTEYFEAEPEDLAAGIKIKHLSKVFQ
VGNKDKMGIRDLTLNLYEGQITVLLGHNGAGKTTTMSMLTGLFPPTSGHAYIRGYEISQD
MVQIRKSLGLCPQHDVLFDNLTVAEHLYFYAQLKGLSVQKCPEEVKQMLHTLGLEDKRDS
RSKFLSGGMKRKLAIGIALIAGSKVLMLDEPTSGMDAVSRRAIWDLLQQQKSDRTVLLTT
HFMDEADLLGDRIAILAKGELQCCGSSLFLKQKYGAGYHMTLVKEPHCNPEGISQLVHHH
VPNAMLESHAGAELSFILPKESTHRFESLFAKLEKKQKELGIASFGASVTTMEEVFLRVG
KLVDTSMDIQAIQLPALQYQHERRASDWALDSNLCGVMDPTNGIGALIEEEEVLVKLNTG
LALHCQQFWAMFLKKAAYSWREWRMVAAQILVPVTCLTLALLAINYTSEIFDDPPLKLSL
NEYGTTVVPFSVPGTSRLGQQLSEHLRDMLQAERQEPREVLGDLEEFLVFRASVEGGGFN
ERCLVATSFKDSGERTVVTALFNNQAYHSPATALAIVDNLLFKLLCGPRASIEISNYPQP
RSTLQVAKDQFNEGRKGFDIALNLLIAMAFLASTFSILAVSERAVQAKHVQFVSGVHVAT
FWLSALLWDLISFLVPSLLLLVVFRAFDVHAFTRDGHMADLLLLLMLYGWAIIPLMYLLS
FFFSAASTAYTRLTIFNILSGIATFIVVTIMRIPAVKLEELSRTLDHVFLVLPNHCLGMA
VSNFYENYETRRYCTSSEVATHYCKKYNIQYQENFYAWSTPGIGKFVTSMAASGGIYLTL
LFLIETNLLWRLRTFVCAFRRRWTLAELQNRTSVLPEDQDVADERSRVLVPSLDSMLDTP
LIINELSKVYDQRAPLLAVDRISLAVQKGECFGLLGFNGAGKTTTFKMLTGEETITSGDA
FVGGYSISSDIGKVRQRMGYCPQFDALLDHMTGREMLVMYARLRGIPERLIDACVENTLR
GLLLEPHANKLVKTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARA
RESGKAIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLQAKVRSEGK
QEVLEEFKAFVDLTFPGSVLEDEHQDMVHYHLPGCDLSWAKVFGILEKAKEKYGVDDYSV
SQISLEQVFLSFAHLQPPTTEDGR
NT seq 5115 nt   +upstreamnt  +downstreamnt
atggtggtgctgcggcagctcaggctcctactctggaagaactatactctgaagaaacgg
aaggtcctagtgacagtcttggagcttttcctgcccctgctgttttctgggatcctgatt
tggcttcgcttgaagatccagtcggagaatgtgcccaatgctactgtttacccagaccag
cacatccaggagctgcccctgtttttctcattccctccacctggggggagctgggagctc
gcctatgtcccttcccacagcgatgctgccaggaccatcacagaggcagtgagaagggaa
ttcatgatcaagatgagagtgcacggcttttcctctgagaaggacttcgaggactacgtt
cgctatgacaaccactcctccaacgtgctggcagctgtggtatttgagcacaccttcaac
cacagcaaggaccccctgccattggcggtgagataccacctacgcttcagttacacgcga
agaaattacatgtggacccaaacaggaaatcttttcctcaaagagactgaaggctggcac
accgcttctcttttcccgcttttcccaagcccaggaccaagggaaccttcatcacctgat
ggcggtgaaccggggtacatccgtgagggcttcctggcagtgcaacacgctgtagacaaa
gccatcatgcattaccatgccaacgcctctgcacaccagctgttccagaagctcacggtg
atcaccaaaaggttcccgttcccgccatacatctcagacccattcctcattgccatccag
taccagcttcctctgctgctcatgctgagcttcacctacacctccctcaccatcatccgg
gctgtggtgcaggagaaagagaaaaaactaaaggagtacatgcgcatgatggggctcagc
agctggctacactggagcgcttggttcctcatgttcctcctgttctccctcatcgtggtc
tccttcatgaccctcctgttctgtgtcaaagtgaagaaggacatagcagtcctttccaac
agcgacccctccctggttctggccttcctgctgtgttttgcaatctcctccatttccttc
agcttcatggtcagcaccttcttcagtaaagccaacatggcagcaaccgtgggcggcttc
ctttacttcttcacctacaccccttactttttcgtggctcctcggtacaactggatgaca
ctgagtcagaagctcttgtcctgcctcctatctaatgttgccatggcgatgggagcccag
ctcatcggaaaatttgaagccaaaggcactggcatccagtggtgtgacctcctgaaccct
gtcaacgtagatgatgatttctgctttggacaagtgctggggatgctgctgctggattca
gtactctatggcctggtgacctggtacgtggaggccgtcttcccaggccagtttggcgtg
ccccagccctggtacttcttccttatgccctcctactggtgtgggaacccaagaacggtc
gtagggaaggaagaggaaggcggcgacccagaaaaggctttcagaaccgagtactttgaa
gctgagccggaggacttggcagctgggatcaagatcaagcacctgtccaaggtgttccaa
gtgggtaataaggacaagatgggcatcagagacctgacgctgaacctgtatgaaggacag
ataacagtcctcctgggccacaacggtgctgggaagaccacgaccatgtctatgctgaca
ggtctcttcccccctaccagtgggcatgcttatattcgtgggtacgagatttcccaagac
atggttcagatccgcaagagtctgggcctgtgcccccagcatgatgtcctgtttgacaac
ctgacagttgcagaacacctttacttctacgcacagttgaaaggcctctctgtccagaag
tgtcctgaagaggtcaagcagatgctgcacaccctcgggctggaagacaagcgggactca
aggtccaagttcctgagcggggggatgaagcgcaagctcgccatcggcatcgccctcata
gcgggctctaaggtgctgatgttagatgagcccacctcaggcatggatgcagtgtccagg
agggccatctgggaccttcttcagcagcagaagagtgaccgcactgtcctgctgaccact
cacttcatggatgaagctgacctgctgggagaccgcattgccatcttggccaagggagag
ctccagtgctgtgggtcttcactgttcctcaagcagaaatatggagctggctaccacatg
acactggtgaaagaaccacactgcaatcctgaaggtatctctcagctggtgcaccaccat
gtccccaatgccatgctggagagccatgctggggccgagttgtcctttattcttcccaag
gaaagcacacacaggtttgaaagtctgtttgctaaactggaaaagaagcagaaggaactg
ggcattgcaagcttcggggcctctgtcaccaccatggaggaggtcttccttcgggttggt
aagctggtggacaccagcatggacattcaagccatccagcttcctgctctgcagtaccag
catgagaggcgggcaagcgactgggctctggatagtaacttgtgtggggtgatggaccca
acgaacggcattggagccctcatagaggaagaagaagttttggtcaagctcaacaccggg
cttgccctccactgccagcagttctgggccatgttcctgaagaaggctgcgtacagctgg
cgggaatggaggatggtagccgctcagatcctggtccccgtgacctgcctcaccctggcc
ctcctggctatcaactacacctcagagatctttgatgaccctcccctgaagctaagcctg
aacgagtatggtacaacagttgtgcccttctcagtcccaggcacatccaggctgggccag
cagctgtctgagcatctaagagacatgctgcaggctgagaggcaggagccccgtgaagtg
ctaggtgacctagaggagttcctggttttcagggcctcagtggaagggggcggctttaat
gagaggtgcctggtagcgacatccttcaaagacagtggagagcggacagtggtcactgcc
ctgttcaacaaccaggcataccactccccagccactgccctggccattgtggacaacctt
ctgttcaagcttctgtgtggccctcgggcctccattgagatctccaactatccccagccc
cggagcaccctgcaggtcgccaaggaccagttcaacgagggccggaagggatttgacatt
gccctcaatttgctcatcgccatggcatttctggccagcacgttttcgatcctggcagtc
agtgagagggccgtccaagccaagcacgttcagtttgtgagcggtgtccatgtggctact
ttctggctctctgctctgctgtgggacctcatctctttcctcgttcccagtctactactt
ctggtggtgttccgagccttcgatgtgcacgccttcacgagggatggccacatggctgac
ttgctgctgctgctcatgctctatggctgggccatcatccccctcatgtacctcctgagc
ttcttcttctcagctgcgtccacggcttacaccaggctgaccatattcaacatcctgtcg
ggcatagccaccttcatcgtggtcactatcatgaggatcccagctgtgaagttagaagag
ctttccagaaccttagatcatgtgttcttggtgctgccaaaccactgcctggggatggcg
gtcagcaacttctatgagaactatgagactcggcgctactgcacgtcctcggaggttgct
acccactactgcaagaagtacaacatccaataccaggagaacttctatgcctggagcacc
ccaggcattggcaagtttgtgacttccatggctgcctcagggggcatctacctcaccctg
ctcttcctcattgagaccaacctgctgtggagactgagaacctttgtctgcgccttccgg
aggaggtggactctggcagaattgcagaaccggacatcagtgcttcctgaggaccaggat
gtagctgatgagaggagccgagtcctggtccctagcttggactccatgcttgacacaccg
ctgatcatcaatgagctctccaaggtgtatgaccagcgtgcaccgctccttgccgtggac
aggatctcccttgcagtccagaaaggggagtgctttggcctgttgggtttcaatggagct
ggaaaaactacaacattcaaaatgctgactggggaggagacgatcacctcgggggatgcc
tttgttggtggttacagcatcagttctgatattgggaaggtacggcagcggatgggctac
tgcccccagtttgatgcactgcttgatcacatgactggcagggaaatgctggtcatgtat
gcacggctccgaggcatcccagagcgtctcatcgatgcctgtgtggagaacactctgcgg
ggtctgctcctggagccacatgccaataaactggtcaagacttacagtggtggtaacaag
cgcaagttaagcactggcatcgccctcattggagagcctgcagtcatcttcctggatgag
ccatctactggcatggaccccgtggcccggcgcctactctgggacactgtagcccgggcc
cgagagtctggcaaagccattgtcatcacctcccacagtatggaggagtgtgaagcctta
tgtacccggctggccatcatggtacagggccagttcaagtgcctgggcagcccacagcac
ctcaagagcaagtttggcagcggctactccctgcaggccaaggtccggagtgaggggaag
caagaagtactagaggagttcaaggcatttgtggacctgaccttcccaggcagcgtccta
gaagatgagcaccaagacatggtccactaccatctgcctggctgtgacctcagctgggcc
aaggtatttggtatcctggagaaggccaaggagaagtatggagtggacgattactctgtg
agtcagatctcgctggagcaggtctttctgagctttgcccacctgcagccccccaccact
gaggatggacgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (10)   
   Pfam (10)   
All databases (35)   

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