KEGG   Rattus norvegicus (rat): 303029
Entry
303029            CDS       T01003                                 
Symbol
Ranbp17
Name
(RefSeq) ran-binding protein 17
  KO
K24115  Ran-binding protein 17
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    303029 (Ranbp17)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    303029 (Ranbp17)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     303029 (Ranbp17)
SSDB
Motif
Pfam: IBN_N Xpo1 NLRX1_C
Other DBs
NCBI-GeneID: 303029
NCBI-ProteinID: NP_001100464
RGD: 1562576
Ensembl: ENSRNOG00000005042
UniProt: A6HDG6 D3ZYN8
Position
10:complement(18304634..18607162)
AA seq 1088 aa
MALHFQSLAELEALCTHLYVGTDLNERIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQ
LLAATCLSKLVTRINPLPVEQRIDIRNYILNYVASQPKLAPFVIQALIQVIAKLTKLGWF
EVQKDEFVFREIIADVKKFLQGTVEHCIIGVIILSELTQEMNLVDYSRPSAKHRKVATSF
RDTSLKDILVLACSLLKQVLAKPLNLQDQDQQSLVMQVLKLVLSCLSFDFLGSSADESAD
DLCTVQIPTTWRTIFLEPETLDLFFNSYHSLPPLLSQLALSCLVQFASTRRSLFSSPERA
KYLGNLIKGVKRILENPQGLSDPGNYHEFCRFLARLKTNYQLGELVLVKEYAEVIGLIAN
FTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSAEPHLLDTYAPEITKAFITSRLESV
AIVVRDNLEDPLDDTATVFQQLEQLCTVSRCEYEKTCTLLVQLFDQNAQNYQKLLHSASG
LAIDMAIQEGRLAWLIYLVGTVVGGRLTYTSTDEHDAMDGELSCRVFQLISLMDTRLPRR
TNEKIELAVLWFLDQFRKTYVGDQLQRTSKVYARMSEVLGITDDNHVLETFMTKIVTNLK
YWGRCEPVISRTLQFLNDLSVGYILLKKLVKIDAVKFMLKNHTREHFPFLGISDTYSVSD
FRCRTTFYTALTRLLMVDLGEDEDEFENFMLPLTVSFETVLQIFNNNFKQEEVKRMLIGL
ARDLRGIAFALNTKTSYTMLFDWMYPAYLPVLQRAIERWYGEPACTTPILKLLAELMQNR
SQRLNFDVSSPNGILLFREASKMICTYGNQILSLGSLSKDQIYPMKLKGISICYSALKSA
LCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHM
SFITNLEPPVLLYVLTSLSEGLTTLDTVVSSSCCTSLDYMVTYLFKHIAKEGKKPLRCRE
AMQAGQRLLHFMQQNPDVLQQMMSVLMNTIVFEDCRNQWSVSRPLLGLILLNEKYFSELR
ASLINSQPLPKQEVLAQCFRNLMEGVEQNLSVKNRDRFTQNLSVFRRDVAEALRSDGHTE
LCSLDMMS
NT seq 3267 nt   +upstreamnt  +downstreamnt
atggcgctgcactttcagagtttggctgagttggaagctctgtgtactcatctctacgta
gggaccgatctcaatgaaagaatagaggctgagaaagcactcttggaactgattgacagc
ccagaatgtctcagcaagtgtcaacttttattagaacaaggaacaacatcctatgctcag
ctccttgcagcaacatgtctttcaaaacttgttacccgaatcaatcctttacctgttgaa
cagaggatagacatcagaaactacattctgaattatgtggcatcccaacctaagctggct
cccttcgtcattcaagctcttattcaagtcattgctaaactcactaagttggggtggttt
gaagttcagaaagacgagtttgttttcagagaaatcattgctgatgtgaagaaattcctc
cagggcacagtggagcactgcataataggggtgataatcctttccgaactgacacaggaa
atgaacctggttgattattccagaccttcagcaaaacataggaaagtagctacctcattt
cgtgatacgtctctaaaagacattctagtgttagcctgttctctcctgaaacaggtgttg
gccaaacctttaaatcttcaggatcaagatcaacaaagcctggtgatgcaagtcttaaag
ctggtcctcagctgcctgagctttgacttcctgggcagttcagcagatgagtctgcggac
gatctttgcacagtgcagattccaacaacctggagaacaattttcctggagccagaaacg
ttggatcttttcttcaattcgtatcactcgcttccacctctgctgtctcagttagcactg
tcatgcttagttcagtttgcttctacaagaagatccttatttagcagtcctgaacgtgcc
aagtaccttggtaacttaattaaaggagtaaaaaggatacttgaaaacccccagggtttg
tctgatcctggtaattatcatgaattttgtcgatttttggctcgtttaaagacaaactat
cagctaggagaattagttttggtgaaggagtatgcggaagttatcggattgattgctaat
tttacaattactagccttcagcattgggagtttgcccccaacagtgttcattacttacta
actctgtggcagaggatggtagcgtccgttccctttgtgaagtcagctgaaccccacttg
ttagacacttatgcacctgaaatcacaaaggccttcatcacgtcccgactggaatctgtt
gccattgttgtaagagataatttagaagaccccctggatgacactgctaccgtgttccag
cagctggagcagctgtgtacagtcagcagatgtgaatatgaaaagacgtgtactcttctt
gttcagctatttgaccaaaatgcacagaactatcaaaagcttctgcattctgcttcaggg
ctagctattgacatggctattcaagaaggtcgtcttgcatggctgatatacttagttggc
acagttgtaggagggagattgacgtacaccagcaccgatgagcatgacgctatggacgga
gaattatcatgccgtgtttttcagctcatatctttaatggataccagattgcctcgccgc
accaacgagaaaatagaacttgcagttctctggttcttggatcagtttcgtaaaacatat
gttggcgatcagcttcagagaacctcaaaggtgtatgcccgtatgtcagaagtcttagga
attacagacgacaaccatgttctggaaacattcatgacgaaaattgttacaaaccttaag
tactggggaagatgtgagcctgtaatctcaaggactcttcagttcctaaatgacctttca
gttggctatatccttttaaaaaaacttgtgaaaatagatgctgtgaaattcatgctgaaa
aaccacacgagagaacacttcccgtttctcggcatcagtgatacttacagtgtgagtgac
ttcaggtgccggacaaccttctacacagccctcactcgccttctcatggtagatctgggc
gaagatgaggatgaatttgagaattttatgctgcctctcacagtctcttttgaaacagtt
ttacaaatattcaacaacaactttaaacaggaagaagtaaagcgtatgttgatcgggctg
gcaagagatcttcgagggattgcctttgcactgaacacaaagaccagctacaccatgctg
tttgactggatgtacccagcgtatctcccagttcttcagagagctattgaacggtggtat
ggagaaccagcatgtactactcctatcttaaaactcttggcagaactgatgcaaaacagg
tcccagcgtttgaattttgatgtatcctctcctaatggaattctcctcttcagggaagcc
agcaagatgatctgtacctatggaaatcagatcctgtctcttgggagtctctcaaaagat
cagatttatccaatgaaactcaagggcatctccatctgctattcagctctcaagtctgca
ttatgtggaaattatgtcagctttggcgtcttcaagttgtatggggacaaccattttgac
aatgtactccaggcctttgtcaaaatgctgctgtcggtgtctcacagtgacttgctgcaa
tatcggaaactgagccagtcgtactatccactcctggagtgtctgacccaggaccacatg
agcttcatcaccaacttggagcctcctgtgctcctatacgtgctcacatctctctcagag
ggactcaccactcttgacacagtcgtctcctccagctgctgtacgagtctagactacatg
gtcacctatctcttcaagcacatagcaaaagaggggaagaagccacttcgatgcagagag
gctatgcaggctggacagagactgttacattttatgcaacaaaacccagatgttctgcag
cagatgatgtctgtcctcatgaacaccattgtctttgaggactgtcggaaccagtggtca
gtatccaggcctctcctggggctcatcctgctcaatgagaagtatttcagtgaactgagg
gcgagtctgataaacagccagcctctccccaagcaggaagtccttgcccagtgcttcagg
aatttgatggaaggagtggagcagaacctgtctgtcaagaacagagacaggttcacacag
aacctctccgtcttcagaagagatgttgcagaggccctgcgcagcgatggccacactgaa
ctatgcagcctggacatgatgagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (2)   
   RefSeq(pep) (7)   
DNA sequence (13)   
   RefSeq(nuc) (11)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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