KEGG   Rattus norvegicus (rat): 303089
Entry
303089            CDS       T01003                                 
Symbol
Trim7
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM7
  KO
K12000  tripartite motif-containing protein 7
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    303089 (Trim7)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    303089 (Trim7)
SSDB
Motif
Pfam: SPRY PRY zf-B_box zf-C3HC4_4 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_6 zf-RING_5 zf-RING_2 zf-C3HC4_3 Anticodon_2
Other DBs
NCBI-GeneID: 303089
NCBI-ProteinID: NP_001385696
RGD: 1307328
Ensembl: ENSRNOG00000002469
Position
10:33706614..33722609
AA seq 510 aa
MATVGPRTGPNSGAEALALAAELQGEATCSICLEFFREPVSVECGHSFCRACIMRCWERP
GAGTGTVTRTLPCPLPCPQCREPARPSQLRPNRQLAAVASLLRRFSLPPTVPGESGTPAV
AAPAAAARCPQHGEQLKLYCQDDGRAICVVCDRAREHRSHAVLPLEEAVQEAKELLDSRM
KALKKVLEDYEAFRSTEERESKELLKQMAAEKEKVGAEFQALRAFLVEQEGRLLSRLEVL
SREVTQKQNENLAQLEGDITQLSKLSSQIQETAQKPDIEFLQEFKNTLSKCSSVPSSKPT
TVSSEMKNKVWNVSLKSFVLKGLLKKFKEDLQGELEKEEKVELSLDPDTANPRLILSLDL
KSVRLGQRAQDLPNHPRRFDTNTRVLASCGFSSGRHHWEVEVGSKDGWAFGVARESVRRK
GLTPFTPEEGVWAMQLNNGQYWAVTSPERTQLNCGQLSRVRVALDLEVGAVSFYAVEDMR
HLYTFRVNFQERVFPLFSVCSTGTYLRIWP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggcgactgtggggccgcgaaccgggccgaactcaggagcggaggctctggcgctggcg
gcagagctccaaggcgaggccacctgctccatctgcctagagtttttccgggaaccggtg
tcggtcgagtgtggccacagcttctgccgcgcctgcatcatgcgctgctgggagcgtccg
ggagctgggaccggcacggtgacccgcacgctgccctgtccactgccctgccctcagtgc
cgcgagcccgctcgccccagccagctgcgacccaataggcagctggccgcggtggcctca
ctcctccggcgcttcagcctaccccccacggtccccggggagagcgggaccccagcggtg
gctgccccggcggcggctgcgcgttgtccgcagcacggagagcaacttaagctctactgc
caagacgacgggcgcgccatttgtgtggtgtgcgaccgcgcccgcgagcaccgttcgcac
gccgtgctgccgctggaggaggcagtgcaggaggccaaggagctgctggattccaggatg
aaggccttgaagaaagtactggaagactatgaagccttcaggtcaacagaggagagggag
agcaaggagcttctaaagcagatggcagcagagaaagagaaggtaggggcagagttccaa
gccctgcgggccttcctggtggagcaggagggtcgacttctaagtcgactggaagtactg
tcccgggaagtgacacagaagcagaatgagaacctggcccagctggagggtgacatcact
cagctgtccaaactcagcagccagatccaggagacagctcagaagccggacatagaattc
ctccaggagttcaaaaacacattaagcaagtgcagcagtgtgcccagctccaagccaacc
acagtctcatccgagatgaagaataaagtgtggaatgtttccctcaagagcttcgtttta
aaaggattgctgaaaaagttcaaagaggatctccagggagagctggagaaagaagagaaa
gtggaactctctttggacccggacacggccaatccccgcctcatcttgtccttggatcta
aagagcgtacgtctaggacagcgcgcccaggacttgcctaaccatcctcgccgcttcgat
accaacacccgcgttttggcgtcctgtggtttctcctcagggcgacatcactgggaggtg
gaagtgggctccaaggatggctgggctttcggtgtggcccgcgagagcgtgcgtcgcaag
ggtctcacaccctttacccccgaggagggcgtctgggctatgcaactcaacaatgggcaa
tactgggcggtgaccagcccagagaggacgcagctcaactgtgggcagctgtcgcgggtg
agggtggctctggaccttgaggtgggagcagtgtccttctatgcagtggaggacatgcgc
cacctttacaccttccgtgtcaacttccaggagcgagtgttcccccttttctctgtttgt
tctactggcacctacttgagaatctggccttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

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